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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890448   E3 ubiquitin-protein ligase MPSR1 
 ath-u.5   AT1G14200   RING/U-box superfamily protein 
 ath-u.5   AT1G26800   RING/U-box superfamily protein 
 gma-u.5   100819587   E3 ubiquitin-protein ligase MPSR1 
 vvi-u.5   100255065   E3 ubiquitin-protein ligase MPSR1 
 ppo-u.5   7498174   E3 ubiquitin-protein ligase MPSR1 
 ppo-u.5   7463037   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7492935   E3 ubiquitin-protein ligase MPSR1 
 mtr-u.5   11412793   E3 ubiquitin-protein ligase MPSR1 
 sly-u.5   101248573   E3 ubiquitin-protein ligase MPSR1 
 zma-u.5   100285280   ubiquitin-protein ligase CIP8 

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Top 50 coexpressed genes to 107890448 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890448 (ghi-r.1 coexpression data)

CoexMap"107890448"


ghiLOC107890448 | Entrez gene ID : 107890448    
Species ghi ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi osa sot nta cre tae
Paralog 1 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_040957778.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1  (predict for XP_040957778.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_040957778.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890448
ath-u.5
for
AT1G14200
ath-u.5
for
AT1G26800
gma-u.5
for
100819587
vvi-u.5
for
100255065
ppo-u.5
for
7498174
ppo-u.5
for
7463037
ppo-u.5
for
7492935
mtr-u.5
for
11412793
sly-u.5
for
101248573
zma-u.5
for
100285280


Ortholog ID: 2299
Species ghi ghi ath ath bra bra bna bna cit gma vvi ppo ppo mtr sly zma tae tae hvu sbi bdi bdi
Symbol LOC107890448 LOC107890197 AT1G26800 AT1G14200 LOC103872115 LOC117127545 LOC106415885 LOC106397503 LOC102613681 LOC100819587 LOC100255065 LOC7492935 LOC7463037 LOC11412793 LOC101248573 LOC100285280 LOC123184947 LOC123040933 LOC123425189 LOC8079365 LOC104583698 LOC100832618
Function* E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL78 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RNF181 E3 ubiquitin-protein ligase RING1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma03040 Spliceosome 4
gma04144 Endocytosis 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu03040 Spliceosome 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi03040 Spliceosome 3
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107890448 107890197 839223 837980 103872115 117127545 106415885 106397503 102613681 100819587 100255065 7492935 7463037 11412793 101248573 100285280 123184947 123040933 123425189 8079365 104583698 100832618
The preparation time of this page was 2.4 [sec].