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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890485   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ghi-r.1   107960338   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ghi-r.1   107942918   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ghi-r.1   107939360   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ath-u.5   AT2G32730   26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 
 ath-u.5   AT1G04810   26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 
 bra-r.6   103857440   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bra-r.6   103865226   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bra-r.6   103867610   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bna-r.1   106451289   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 bna-r.1   106387997   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bna-r.1   106447099   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 cit-r.1   102615994   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 gma-u.5   100817941   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 gma-u.5   100790425   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 vvi-u.5   100264792   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 vvi-u.5   100260616   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ppo-u.5   7496626   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ppo-u.5   7461669   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 mtr-u.5   25486962   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 mtr-u.5   11407588   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sly-u.5   101261856   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sly-u.5   101259750   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sot-r.1   102586542   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 sot-r.1   102585142   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 nta-r.1   107808390   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 nta-r.1   107804491   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 nta-r.1   107783497   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 osa-u.5   4336931   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 osa-u.5   4344971   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 zma-u.5   100382965   uncharacterized LOC100382965 
 zma-u.5   100274443   uncharacterized LOC100274443 
 zma-u.5   103645964   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 tae-r.2   123190239   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 tae-r.2   123046504   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 tae-r.2   123141332   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 hvu-r.1   123427666   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 sbi-r.1   8063939   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sbi-r.1   8072167   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bdi-r.1   100828654   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 bdi-r.1   100835233   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 cre-r.1   CHLRE_17g727950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107890485 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890485 (ghi-r.1 coexpression data)

CoexMap"107890485"


ghiLOC107890485 | Entrez gene ID : 107890485    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 2 2 2 2 2 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (96 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (12 genes)  IEA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (58 genes)  IEA  
GO:0000502 [list] [network] proteasome complex  (162 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0030234 [list] [network] enzyme regulator activity  (1200 genes)  IEA  
Protein XP_016670425.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for XP_016670425.1)
Subcellular
localization
TargetP
scret 4  (predict for XP_016670425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890485
ghi-r.1
for
107960338
ghi-r.1
for
107942918
ghi-r.1
for
107939360
ath-u.5
for
AT2G32730
ath-u.5
for
AT1G04810
bra-r.6
for
103857440
bra-r.6
for
103865226
bra-r.6
for
103867610
bna-r.1
for
106451289
bna-r.1
for
106387997
bna-r.1
for
106447099
cit-r.1
for
102615994
gma-u.5
for
100817941
gma-u.5
for
100790425
vvi-u.5
for
100264792
vvi-u.5
for
100260616
ppo-u.5
for
7496626
ppo-u.5
for
7461669
mtr-u.5
for
25486962
mtr-u.5
for
11407588
sly-u.5
for
101261856
sly-u.5
for
101259750
sot-r.1
for
102586542
sot-r.1
for
102585142
nta-r.1
for
107808390
nta-r.1
for
107804491
nta-r.1
for
107783497
osa-u.5
for
4336931
osa-u.5
for
4344971
zma-u.5
for
100382965
zma-u.5
for
100274443
zma-u.5
for
103645964
tae-r.2
for
123190239
tae-r.2
for
123046504
tae-r.2
for
123141332
hvu-r.1
for
123427666
sbi-r.1
for
8063939
sbi-r.1
for
8072167
bdi-r.1
for
100828654
bdi-r.1
for
100835233
cre-r.1
for
CHLRE_17g727950v5


Ortholog ID: 3086
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC107960338 LOC107942918 LOC107887872 AT2G32730 AT1G04810 LOC103857440 LOC103865226 LOC103867610 LOC106451289 LOC106387997 LOC106427681 LOC102615994 LOC100817941 LOC100790425 LOC100264792 LOC100260616 LOC7496626 LOC7461669 LOC25486962 LOC11407588 LOC101261856 LOC101259750 LOC102586542 LOC102585142 LOC107808390 LOC107804491 LOC107783497 LOC4336931 LOC4344971 LOC100274443 LOC103645964 LOC103642042 LOC123046504 LOC123054362 LOC123182717 LOC123427666 LOC8063939 LOC8072167 LOC100828654 LOC100835233 CHLRE_17g727950v5
Function* 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A uncharacterized LOC100274443 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 11
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 8
ath04141 Protein processing in endoplasmic reticulum 4
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath04141 Protein processing in endoplasmic reticulum 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 12
bra04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03050 Proteasome 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
gma04141 Protein processing in endoplasmic reticulum 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 12
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
ppo00566 Sulfoquinovose metabolism 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03050 Proteasome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03050 Proteasome 3
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta04075 Plant hormone signal transduction 2
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 15
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03050 Proteasome 4
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae00620 Pyruvate metabolism 4
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu03050 Proteasome 3
hvu03060 Protein export 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03015 mRNA surveillance pathway 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04120 Ubiquitin mediated proteolysis 4
bdi03015 mRNA surveillance pathway 3
bdi04382 Cornified envelope formation 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107960338 107942918 107887872 817833 839409 103857440 103865226 103867610 106451289 106387997 106427681 102615994 100817941 100790425 100264792 100260616 7496626 7461669 25486962 11407588 101261856 101259750 102586542 102585142 107808390 107804491 107783497 4336931 4344971 100274443 103645964 103642042 123046504 123054362 123182717 123427666 8063939 8072167 100828654 100835233 5722814
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