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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890564   bromodomain-containing protein 4 
 ath-u.5   ESP1   hydroxyproline-rich glycoprotein family protein 
 gma-u.5   548018   proline-rich protein precursor 
 gma-u.5   100801770   cleavage stimulating factor 64 
 gma-u.5   100811481   cleavage stimulating factor 64 
 vvi-u.5   100255879   cleavage stimulating factor 64 
 vvi-u.5   104882343   uncharacterized LOC104882343 
 vvi-u.5   100261251   uncharacterized LOC100261251 
 ppo-u.5   7487072   cleavage stimulating factor 64 
 mtr-u.5   11411154   cyclin-K 
 sly-u.5   101248183   cleavage stimulating factor 64 
 osa-u.5   4339300   cleavage stimulating factor 64 
 zma-u.5   103630598   pollen-specific leucine-rich repeat extensin-like protein 3 

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Top 50 coexpressed genes to 107890564 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890564 (ghi-r.1 coexpression data)

CoexMap"107890564"


ghiLOC107890564 | Entrez gene ID : 107890564    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031124 [list] [network] mRNA 3'-end processing  (35 genes)  IEA  
GO CC
GO MF
Protein XP_016670544.1 [sequence] [blastp]
XP_016670552.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_016670544.1)
nucl 9,  chlo 1,  extr 1  (predict for XP_016670552.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016670544.1)
other 8  (predict for XP_016670552.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890564
ath-u.5
for
ESP1
gma-u.5
for
548018
gma-u.5
for
100801770
gma-u.5
for
100811481
vvi-u.5
for
100255879
vvi-u.5
for
104882343
vvi-u.5
for
100261251
ppo-u.5
for
7487072
mtr-u.5
for
11411154
sly-u.5
for
101248183
osa-u.5
for
4339300
zma-u.5
for
103630598


Ortholog ID: 4478
Species ghi ghi ath bra bra bna bna cit gma gma vvi vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi sbi bdi
Symbol LOC121230628 LOC107944743 ESP1 LOC103831860 LOC103830728 LOC106407203 LOC125594932 LOC102628566 LOC100782099 LOC548018 LOC100261251 LOC100255879 LOC7487072 LOC11411154 LOC101248183 LOC102593956 LOC107806009 LOC107821640 LOC4339300 LOC103630598 LOC123062799 LOC123182619 LOC123447242 LOC110430594 LOC8076706 LOC100837175
Function* uncharacterized LOC121230628 cleavage stimulating factor 64-like hydroxyproline-rich glycoprotein family protein cleavage stimulating factor 64 trithorax group protein osa cleavage stimulating factor 64-like cleavage stimulating factor 64-like uncharacterized LOC102628566 cleavage stimulating factor 64 proline-rich protein precursor uncharacterized LOC100261251 cleavage stimulating factor 64 cleavage stimulating factor 64 cyclin-K cleavage stimulating factor 64 cleavage stimulating factor 64 uncharacterized LOC107806009 uncharacterized LOC107821640 cleavage stimulating factor 64 pollen-specific leucine-rich repeat extensin-like protein 3 basic salivary proline-rich protein 1 bromodomain-containing protein 4 cleavage stimulating factor 64 pollen-specific leucine-rich repeat extensin-like protein 3 extensin cleavage stimulating factor 64
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
vvi03013 Nucleocytoplasmic transport 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae04144 Endocytosis 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121230628 107944743 843720 103831860 103830728 106407203 125594932 102628566 100782099 548018 100261251 100255879 7487072 11411154 101248183 102593956 107806009 107821640 4339300 103630598 123062799 123182619 123447242 110430594 8076706 100837175
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