Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891770   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 ghi-r.1   107952804   uncharacterized LOC107952804 
 ghi-r.1   107945374   uncharacterized LOC107945374 
 ghi-r.1   107934649   peroxisomal (S)-2-hydroxy-acid oxidase GLO5 
 gma-u.5   100783041   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100244236   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100246659   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100256928   pentatricopeptide repeat-containing protein At1g62910 
 mtr-u.5   11417028   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 

close


Top 50 coexpressed genes to 107891770 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107891770 (ghi-r.1 coexpression data)

CoexMap"107891770"


ghiLOC107891770 | Entrez gene ID : 107891770    
Species ghi gma vvi mtr hvu sot bdi sly nta osa tae bna ppo zma cre sbi bra ath cit
Paralog 4 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006438 [list] [network] valyl-tRNA aminoacylation  (13 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004832 [list] [network] valine-tRNA ligase activity  (13 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040956337.1 [sequence] [blastp]
XP_040956338.1 [sequence] [blastp]
XP_040956339.1 [sequence] [blastp]
XP_040956340.1 [sequence] [blastp]
XP_040956341.1 [sequence] [blastp]
XP_040956342.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  extr 1,  golg 1,  chlo_mito 1  (predict for XP_040956337.1)
cyto 4,  chlo 3,  extr 1,  golg 1,  chlo_mito 1  (predict for XP_040956338.1)
cyto 4,  chlo 3,  extr 1,  golg 1,  chlo_mito 1  (predict for XP_040956339.1)
cyto 4,  chlo 3,  extr 1,  golg 1,  chlo_mito 1  (predict for XP_040956340.1)
chlo 4,  extr 2,  chlo_mito 2,  nucl 1  (predict for XP_040956341.1)
chlo 4,  extr 2,  chlo_mito 2,  nucl 1  (predict for XP_040956342.1)
Subcellular
localization
TargetP
other 5  (predict for XP_040956337.1)
other 5  (predict for XP_040956338.1)
other 5  (predict for XP_040956339.1)
other 5  (predict for XP_040956340.1)
other 6  (predict for XP_040956341.1)
other 6  (predict for XP_040956342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891770
ghi-r.1
for
107952804
ghi-r.1
for
107945374
ghi-r.1
for
107934649
gma-u.5
for
100783041
vvi-u.5
for
100244236
vvi-u.5
for
100246659
vvi-u.5
for
100256928
mtr-u.5
for
11417028


Ortholog ID: 13636
Species ghi ghi ghi gma vvi vvi vvi mtr
Symbol LOC107891770 LOC107912806 LOC107909983 LOC100783041 LOC100244236 LOC100246659 LOC100256928 LOC11417028
Function* valine--tRNA ligase, chloroplastic/mitochondrial 2 (S)-2-hydroxy-acid oxidase GLO1 uncharacterized LOC107909983 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial pentatricopeptide repeat-containing protein At1g62910 pentatricopeptide repeat-containing protein At1g62930, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891770 107912806 107909983 100783041 100244236 100246659 100256928 11417028
The preparation time of this page was 0.1 [sec].