ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107892306	xyloglucan glycosyltransferase 4
ghi-r.1	121229028	probable xyloglucan glycosyltransferase 12
ghi-r.1	107938322	probable xyloglucan glycosyltransferase 12
ghi-r.1	107905166	probable xyloglucan glycosyltransferase 12
ath-u.5	ATCSLC08	Glycosyl transferase family 2 protein
ath-u.5	CSLC6	Cellulose-synthase-like C6
ath-u.5	CSLC04	Cellulose-synthase-like C4
bra-r.6	103859212	probable xyloglucan glycosyltransferase 6
bra-r.6	103858463	probable xyloglucan glycosyltransferase 12
bra-r.6	103851712	probable xyloglucan glycosyltransferase 5
bna-r.1	106388906	probable xyloglucan glycosyltransferase 6
bna-r.1	111208179	probable xyloglucan glycosyltransferase 5
bna-r.1	106354734	probable xyloglucan glycosyltransferase 5
cit-r.1	102611557	probable xyloglucan glycosyltransferase 12
cit-r.1	102607370	probable xyloglucan glycosyltransferase 5
gma-u.5	100808124	xyloglucan glycosyltransferase 4
gma-u.5	100818436	probable xyloglucan glycosyltransferase 12
gma-u.5	100818571	xyloglucan glycosyltransferase 4
vvi-u.5	100265643	probable xyloglucan glycosyltransferase 5
vvi-u.5	100250441	probable xyloglucan glycosyltransferase 6
vvi-u.5	100244115	xyloglucan glycosyltransferase 4
ppo-u.5	7489772	probable xyloglucan glycosyltransferase 12
ppo-u.5	7489177	probable xyloglucan glycosyltransferase 5
ppo-u.5	7467244	probable xyloglucan glycosyltransferase 12
mtr-u.5	11424320	probable xyloglucan glycosyltransferase 6
mtr-u.5	11427352	probable xyloglucan glycosyltransferase 5
mtr-u.5	11434384	probable xyloglucan glycosyltransferase 5
sly-u.5	101263749	probable xyloglucan glycosyltransferase 6
sly-u.5	101267858	cellulose-synthase-like
sly-u.5	101254463	probable xyloglucan glycosyltransferase 12
sot-r.1	102593638	probable xyloglucan glycosyltransferase 12
sot-r.1	102580102	probable xyloglucan glycosyltransferase 12
sot-r.1	102588069	xyloglucan glycosyltransferase 4
nta-r.1	107764156	putative xyloglucan glycosyltransferase 5
nta-r.1	107764527	putative xyloglucan glycosyltransferase 12
nta-r.1	107777230	putative xyloglucan glycosyltransferase 12
osa-u.5	4325496	probable xyloglucan glycosyltransferase 1
osa-u.5	107275797	putative xyloglucan glycosyltransferase 10
osa-u.5	4339283	probable xyloglucan glycosyltransferase 7
zma-u.5	103636615	probable xyloglucan glycosyltransferase 1
zma-u.5	100383102	putative xyloglucan glycosyltransferase 12
zma-u.5	103644075	probable xyloglucan glycosyltransferase 9
tae-r.2	123068147	probable xyloglucan glycosyltransferase 3
tae-r.2	123062167	probable xyloglucan glycosyltransferase 1
tae-r.2	123062658	probable xyloglucan glycosyltransferase 7
hvu-r.1	123444502	probable xyloglucan glycosyltransferase 1
hvu-r.1	123439088	probable xyloglucan glycosyltransferase 3
sbi-r.1	8060282	probable xyloglucan glycosyltransferase 2
sbi-r.1	8067927	probable xyloglucan glycosyltransferase 3
bdi-r.1	100846843	putative xyloglucan glycosyltransferase 10
bdi-r.1	100836031	probable xyloglucan glycosyltransferase 1
bdi-r.1	100836691	probable xyloglucan glycosyltransferase 9

Top 50 coexpressed genes to 107892306 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107892306 (ghi-r.1 coexpression data)

CoexMap"107892306"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(1381 genes)

IEA

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(1256 genes)

IEA

Protein

XP_016672832.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 1, nucl 1, mito 1, vacu 1, cyto_E.R. 1

(predict for XP_016672832.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016672832.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107892306	ghi-r.1 for 121229028	ghi-r.1 for 107938322	ghi-r.1 for 107905166	ath-u.5 for ATCSLC08	ath-u.5 for CSLC6	ath-u.5 for CSLC04	bra-r.6 for 103859212	bra-r.6 for 103858463	bra-r.6 for 103851712	bna-r.1 for 106388906	bna-r.1 for 111208179	bna-r.1 for 106354734	cit-r.1 for 102611557	cit-r.1 for 102607370	gma-u.5 for 100808124	gma-u.5 for 100818436	gma-u.5 for 100818571	vvi-u.5 for 100265643	vvi-u.5 for 100250441	vvi-u.5 for 100244115	ppo-u.5 for 7489772	ppo-u.5 for 7489177	ppo-u.5 for 7467244	mtr-u.5 for 11424320	mtr-u.5 for 11427352	mtr-u.5 for 11434384	sly-u.5 for 101263749	sly-u.5 for 101267858	sly-u.5 for 101254463	sot-r.1 for 102593638	sot-r.1 for 102580102	sot-r.1 for 102588069	nta-r.1 for 107764156	nta-r.1 for 107764527	nta-r.1 for 107777230	osa-u.5 for 4325496	osa-u.5 for 107275797	osa-u.5 for 4339283	zma-u.5 for 103636615	zma-u.5 for 100383102	zma-u.5 for 103644075	tae-r.2 for 123068147	tae-r.2 for 123062167	tae-r.2 for 123062658	hvu-r.1 for 123444502	hvu-r.1 for 123439088	sbi-r.1 for 8060282	sbi-r.1 for 8067927	bdi-r.1 for 100846843	bdi-r.1 for 100836031	bdi-r.1 for 100836691

Ortholog

Ortholog ID: 476

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CSLC04

CSLC5

Function^*

probable xyloglucan glycosyltransferase 12