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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107892391   60S ribosomal protein L34 
 ghi-r.1   107934861   60S ribosomal protein L34 
 ghi-r.1   107940656   60S ribosomal protein L34 
 ghi-r.1   107886864   60S ribosomal protein L34 
 ath-u.5   AT3G28900   Ribosomal protein L34e superfamily protein 
 ath-u.5   AT1G26880   Ribosomal protein L34e superfamily protein 
 ath-u.5   RPL34   ribosomal protein L34 
 bra-r.6   103830922   60S ribosomal protein L34-2 
 bra-r.6   103831364   60S ribosomal protein L34-2 
 bna-r.1   106402071   60S ribosomal protein L34-2-like 
 bna-r.1   125591514   60S ribosomal protein L34-1-like 
 bna-r.1   106353826   60S ribosomal protein L34-2 
 cit-r.1   102618065   60S ribosomal protein L34 
 gma-u.5   100785061   60S ribosomal protein L34 
 gma-u.5   100499882   uncharacterized LOC100499882 
 gma-u.5   100305798   uncharacterized LOC100305798 
 vvi-u.5   100241433   large ribosomal subunit protein eL34 
 vvi-u.5   100252617   large ribosomal subunit protein eL34 
 ppo-u.5   7484340   60S ribosomal protein L34 
 ppo-u.5   112326175   60S ribosomal protein L34 
 ppo-u.5   7495969   60S ribosomal protein L34 
 mtr-u.5   11408889   60S ribosomal protein L34 
 mtr-u.5   25502702   60S ribosomal protein L34 
 mtr-u.5   11429919   60S ribosomal protein L34 
 sly-u.5   101266720   large ribosomal subunit protein eL34 
 sly-u.5   101254152   large ribosomal subunit protein eL34 
 sly-u.5   101253597   large ribosomal subunit protein eL34 
 sot-r.1   102586304   60S ribosomal protein L34 
 sot-r.1   102585523   60S ribosomal protein L34-like 
 nta-r.1   107820542   large ribosomal subunit protein eL34 
 nta-r.1   107817140   large ribosomal subunit protein eL34-like 
 nta-r.1   107762102   large ribosomal subunit protein eL34-like 
 osa-u.5   9267671   large ribosomal subunit protein eL34 
 osa-u.5   4345669   large ribosomal subunit protein eL34 
 osa-u.5   4344696   large ribosomal subunit protein eL34 
 zma-u.5   100286075   60S ribosomal protein L34 
 zma-u.5   100285578   60S ribosomal protein L34 
 zma-u.5   100193910   60S ribosomal protein L34 
 tae-r.2   123189432   60S ribosomal protein L34 
 tae-r.2   606339   60S ribosomal protein L34 
 tae-r.2   123112126   60S ribosomal protein L34 
 hvu-r.1   123407823   60S ribosomal protein L34-like 
 hvu-r.1   123398291   60S ribosomal protein L34 
 hvu-r.1   123426913   60S ribosomal protein L34 
 sbi-r.1   8076595   60S ribosomal protein L34 
 sbi-r.1   8077830   60S ribosomal protein L34 
 sbi-r.1   8060244   60S ribosomal protein L34 
 bdi-r.1   100837098   60S ribosomal protein L34 
 bdi-r.1   100840028   60S ribosomal protein L34 
 cre-r.1   CHLRE_16g661050v5   ribosomal protein L34 

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Top 50 coexpressed genes to 107892391 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107892391 (ghi-r.1 coexpression data)

CoexMap"107892391"


ghiLOC107892391 | Entrez gene ID : 107892391    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 1 3 2 3 3 3 2 3 3 3 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (752 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016672958.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1  (predict for XP_016672958.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016672958.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107892391
ghi-r.1
for
107934861
ghi-r.1
for
107940656
ghi-r.1
for
107886864
ath-u.5
for
AT3G28900
ath-u.5
for
AT1G26880
ath-u.5
for
RPL34
bra-r.6
for
103830922
bra-r.6
for
103831364
bna-r.1
for
106402071
bna-r.1
for
125591514
bna-r.1
for
106353826
cit-r.1
for
102618065
gma-u.5
for
100785061
gma-u.5
for
100499882
gma-u.5
for
100305798
vvi-u.5
for
100241433
vvi-u.5
for
100252617
ppo-u.5
for
7484340
ppo-u.5
for
112326175
ppo-u.5
for
7495969
mtr-u.5
for
11408889
mtr-u.5
for
25502702
mtr-u.5
for
11429919
sly-u.5
for
101266720
sly-u.5
for
101254152
sly-u.5
for
101253597
sot-r.1
for
102586304
sot-r.1
for
102585523
nta-r.1
for
107820542
nta-r.1
for
107817140
nta-r.1
for
107762102
osa-u.5
for
9267671
osa-u.5
for
4345669
osa-u.5
for
4344696
zma-u.5
for
100286075
zma-u.5
for
100285578
zma-u.5
for
100193910
tae-r.2
for
123189432
tae-r.2
for
606339
tae-r.2
for
123112126
hvu-r.1
for
123407823
hvu-r.1
for
123398291
hvu-r.1
for
123426913
sbi-r.1
for
8076595
sbi-r.1
for
8077830
sbi-r.1
for
8060244
bdi-r.1
for
100837098
bdi-r.1
for
100840028
cre-r.1
for
CHLRE_16g661050v5


Ortholog ID: 1111
Species ghi ghi ghi ath ath ath bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107940656 LOC107886864 LOC107946513 AT3G28900 AT1G26880 RPL34 LOC103831364 LOC103837036 LOC106402071 LOC106379530 LOC106392888 LOC102618065 LOC100785061 LOC100499882 LOC100305798 LOC100241433 LOC100252617 LOC112326175 LOC7495969 LOC18105866 LOC11408889 LOC25502702 LOC11429919 LOC101266720 LOC101254152 LOC101253597 LOC102585523 LOC102605171 LOC107779746 LOC107771505 LOC107768952 LOC9267671 LOC4345669 LOC4344696 LOC100286075 LOC100193910 LOC100217171 LOC123045663 LOC123165465 LOC123121695 LOC123407823 LOC123398291 LOC123426913 LOC8076595 LOC8077830 LOC8060244 LOC100837098 LOC100840028 CHLRE_16g661050v5
Function* 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 Ribosomal protein L34e superfamily protein Ribosomal protein L34e superfamily protein ribosomal protein L34 60S ribosomal protein L34-2 60S ribosomal protein L34-2 60S ribosomal protein L34-2-like 60S ribosomal protein L34-1 60S ribosomal protein L34-2-like 60S ribosomal protein L34 60S ribosomal protein L34 uncharacterized LOC100499882 uncharacterized LOC100305798 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 60S ribosomal protein L34-like 60S ribosomal protein L34-like large ribosomal subunit protein eL34-like large ribosomal subunit protein eL34-like large ribosomal subunit protein eL34-like large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34-like 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 ribosomal protein L34
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
nta04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03420 Nucleotide excision repair 3
nta03040 Spliceosome 3
nta03010 Ribosome 3
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107940656 107886864 107946513 822524 838331 843298 103831364 103837036 106402071 106379530 106392888 102618065 100785061 100499882 100305798 100241433 100252617 112326175 7495969 18105866 11408889 25502702 11429919 101266720 101254152 101253597 102585523 102605171 107779746 107771505 107768952 9267671 4345669 4344696 100286075 100193910 100217171 123045663 123165465 123121695 123407823 123398291 123426913 8076595 8077830 8060244 100837098 100840028 5723498
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