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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107895246   probable E3 ubiquitin-protein ligase ZFP1 
 ghi-r.1   107917750   probable E3 ubiquitin-protein ligase ZFP1 
 ghi-r.1   107920460   probable E3 ubiquitin-protein ligase ZFP1 
 ghi-r.1   107935665   probable E3 ubiquitin-protein ligase ZFP1 
 ath-u.5   AT3G15070   RING/U-box superfamily protein 
 ath-u.5   AT1G53190   RING/U-box superfamily protein 
 bra-r.6   103859606   probable E3 ubiquitin-protein ligase ZFP1 
 bra-r.6   103868448   probable E3 ubiquitin-protein ligase ZFP1 
 bra-r.6   103869959   probable E3 ubiquitin-protein ligase ZFP1 
 bna-r.1   125597336   probable E3 ubiquitin-protein ligase ZFP1 
 bna-r.1   111215704   probable E3 ubiquitin-protein ligase ZFP1 
 bna-r.1   125597627   probable E3 ubiquitin-protein ligase HIP1 
 cit-r.1   102621766   hypothetical protein 
 gma-u.5   100808611   probable E3 ubiquitin-protein ligase ZFP1 
 gma-u.5   100808448   probable E3 ubiquitin-protein ligase ZFP1 
 vvi-u.5   100251458   uncharacterized LOC100251458 
 vvi-u.5   100264059   probable E3 ubiquitin-protein ligase ZFP1 
 vvi-u.5   100257670   probable E3 ubiquitin-protein ligase ZFP1 
 ppo-u.5   7463788   probable E3 ubiquitin-protein ligase ZFP1 
 ppo-u.5   7487574   probable E3 ubiquitin-protein ligase ZFP1 
 mtr-u.5   25487280   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101263764   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101248221   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101255962   probable E3 ubiquitin-protein ligase ZFP1 
 sot-r.1   102580795   probable E3 ubiquitin-protein ligase HIP1 
 sot-r.1   102588519   uncharacterized LOC102588519 
 sot-r.1   102600149   uncharacterized LOC102600149 
 nta-r.1   107814024   putative E3 ubiquitin-protein ligase ZFP1 
 nta-r.1   107770723   putative E3 ubiquitin-protein ligase ZFP1 
 nta-r.1   107774089   putative E3 ubiquitin-protein ligase ZFP1 

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Top 50 coexpressed genes to 107895246 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107895246 (ghi-r.1 coexpression data)

CoexMap"107895246"


ghiLOC107895246 | Entrez gene ID : 107895246    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma cre sbi tae osa hvu bdi
Paralog 4 2 3 3 1 2 3 2 1 3 3 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016676017.1 [sequence] [blastp]
XP_016676018.1 [sequence] [blastp]
XP_040941302.1 [sequence] [blastp]
XP_040941303.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_016676017.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_016676018.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_040941302.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_040941303.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016676017.1)
other 8  (predict for XP_016676018.1)
other 8  (predict for XP_040941302.1)
other 8  (predict for XP_040941303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107895246
ghi-r.1
for
107917750
ghi-r.1
for
107920460
ghi-r.1
for
107935665
ath-u.5
for
AT3G15070
ath-u.5
for
AT1G53190
bra-r.6
for
103859606
bra-r.6
for
103868448
bra-r.6
for
103869959
bna-r.1
for
125597336
bna-r.1
for
111215704
bna-r.1
for
125597627
cit-r.1
for
102621766
gma-u.5
for
100808611
gma-u.5
for
100808448
vvi-u.5
for
100251458
vvi-u.5
for
100264059
vvi-u.5
for
100257670
ppo-u.5
for
7463788
ppo-u.5
for
7487574
mtr-u.5
for
25487280
sly-u.5
for
101263764
sly-u.5
for
101248221
sly-u.5
for
101255962
sot-r.1
for
102580795
sot-r.1
for
102588519
sot-r.1
for
102600149
nta-r.1
for
107814024
nta-r.1
for
107770723
nta-r.1
for
107774089


Ortholog ID: 3221
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi vvi vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta
Symbol LOC107920460 LOC107939195 LOC121209430 AT3G15070 AT1G53190 LOC103859606 LOC103868448 LOC103869959 LOC111215704 LOC106451456 BNACNNG59350D LOC102621766 LOC100808448 LOC100779069 LOC100251458 LOC100264059 LOC100246312 LOC7463788 LOC7487574 LOC25487280 LOC101263764 LOC101248221 LOC101255962 LOC102580795 LOC102588519 LOC102600149 LOC107814024 LOC107770723 LOC107777037
Function* probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase ZFP1 hypothetical protein probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 uncharacterized LOC100251458 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC102588519 uncharacterized LOC102600149 putative E3 ubiquitin-protein ligase ZFP1 putative E3 ubiquitin-protein ligase ZFP1 putative E3 ubiquitin-protein ligase ZFP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920460 107939195 121209430 820736 841753 103859606 103868448 103869959 111215704 106451456 106397295 102621766 100808448 100779069 100251458 100264059 100246312 7463788 7487574 25487280 101263764 101248221 101255962 102580795 102588519 102600149 107814024 107770723 107777037
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