ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107896224	uncharacterized LOC107896224
ghi-r.1	107915201	uncharacterized LOC107915201
ath-u.5	AT2G38695	Gag-Pol polyprotein/retrotransposon
bra-r.6	103857808	uncharacterized LOC103857808
cit-r.1	102618398	uncharacterized LOC102618398
cit-r.1	102628698	uncharacterized LOC102628698
gma-u.5	100812769	uncharacterized LOC100812769
gma-u.5	100814328	uncharacterized LOC100814328
ppo-u.5	7461324	uncharacterized LOC7461324
mtr-u.5	25488552	uncharacterized LOC25488552
sly-u.5	101260146	uncharacterized LOC101260146
sly-u.5	101268479	uncharacterized LOC101268479
sot-r.1	102580174	uncharacterized LOC102580174
sot-r.1	102578377	uncharacterized LOC102578377
nta-r.1	107813410	uncharacterized LOC107813410
nta-r.1	107812366	uncharacterized LOC107812366
nta-r.1	107783463	uncharacterized LOC107783463
osa-u.5	4336873	uncharacterized LOC4336873
osa-u.5	4347184	uncharacterized LOC4347184
zma-u.5	100276234	uncharacterized LOC100276234
tae-r.2	123121509	uncharacterized LOC123121509
hvu-r.1	123397954	uncharacterized LOC123397954
sbi-r.1	8081005	uncharacterized LOC8081005
bdi-r.1	100823337	uncharacterized LOC100823337
cre-r.1	CHLRE_06g290300v5	uncharacterized protein
cre-r.1	CHLRE_01g005001v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016676813.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 2, golg_plas 2, E.R._plas 2

(predict for XP_016676813.2)

Subcellular
localization
TargetP

chlo 5, other 3

(predict for XP_016676813.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107896224	ghi-r.1 for 107915201	ath-u.5 for AT2G38695	bra-r.6 for 103857808	cit-r.1 for 102618398	cit-r.1 for 102628698	gma-u.5 for 100812769	gma-u.5 for 100814328	ppo-u.5 for 7461324	mtr-u.5 for 25488552	sly-u.5 for 101260146	sly-u.5 for 101268479	sot-r.1 for 102580174	sot-r.1 for 102578377	nta-r.1 for 107813410	nta-r.1 for 107812366	nta-r.1 for 107783463	osa-u.5 for 4336873	osa-u.5 for 4347184	zma-u.5 for 100276234	tae-r.2 for 123121509	hvu-r.1 for 123397954	sbi-r.1 for 8081005	bdi-r.1 for 100823337	cre-r.1 for CHLRE_06g290300v5	cre-r.1 for CHLRE_01g005001v5

Ortholog

Ortholog ID: 4836

Species

ghi

ath

bra

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107896224

uncharacterized LOC107915201

Gag-Pol polyprotein/retrotransposon

uncharacterized LOC103857808

uncharacterized LOC102618398

uncharacterized LOC102628698

uncharacterized LOC100812769

uncharacterized LOC100814328

uncharacterized LOC100264237

uncharacterized LOC100263253

uncharacterized LOC7461324

uncharacterized LOC25488552

uncharacterized LOC101260146

uncharacterized LOC101268479

uncharacterized LOC102580174

uncharacterized LOC102578377

uncharacterized LOC107813410

uncharacterized LOC107812366

uncharacterized LOC107783463

uncharacterized LOC4336873

uncharacterized LOC4347184

uncharacterized LOC100276234

uncharacterized LOC123121509

uncharacterized LOC123397954

uncharacterized LOC8081005

uncharacterized LOC100823337

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00740	Riboflavin metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00051	Fructose and mannose metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00380	Tryptophan metabolism	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2
osa00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2
zma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00710	Carbon fixation by Calvin cycle	5
cre01200	Carbon metabolism	5
cre00010	Glycolysis / Gluconeogenesis	2

Expression

Expression pattern

Entrez Gene ID^*

107896224

107915201

2745586

103857808

102618398

102628698

100812769

100814328

100264237

100263253

7461324

25488552

101260146

101268479

102580174

102578377

107813410

107812366

107783463

4336873

4347184

100276234

123121509

123397954

8081005

100823337

5721081

5727649

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107896224 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107896224 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	cit	gma	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	vvi	bna
Paralog	2	1	1	2	2	1	1	2	2	3	2	1	1	1	1	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107896224 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107896224 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**