ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107896769	60S ribosomal protein L5
ath-u.5	ATL5	ribosomal protein L5
ath-u.5	RPL5B	ribosomal protein L5 B
gma-u.5	100817746	60S ribosomal protein L5
gma-u.5	100805868	60S ribosomal protein L5
gma-u.5	100786189	60S ribosomal protein L5
vvi-u.5	100242372	large ribosomal subunit protein uL18
vvi-u.5	100262824	large ribosomal subunit protein uL18
ppo-u.5	18108544	60S ribosomal protein L5
ppo-u.5	7469360	60S ribosomal protein L5
ppo-u.5	18104605	60S ribosomal protein L5
mtr-u.5	11411613	60S ribosomal protein L5-2
mtr-u.5	25500767	60S ribosomal protein L5
sly-u.5	101262823	large ribosomal subunit protein uL18
sly-u.5	101253089	60S ribosomal protein L5-like
sly-u.5	101245873	large ribosomal subunit protein uL18
osa-u.5	4325100	60S ribosomal protein L5-1-like
osa-u.5	9271934	60S ribosomal protein L5-2-like
zma-u.5	103650892	60S ribosomal protein L5-1
zma-u.5	100284917	60S ribosomal protein L5-1
zma-u.5	103631647	60S ribosomal protein L5-1

Top 50 coexpressed genes to 107896769 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107896769 (ghi-r.1 coexpression data)

CoexMap"107896769"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO:0000027 [list] [network] ribosomal large subunit assembly	(68 genes)	IEA
GO:0006412 [list] [network] translation	(1487 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(467 genes)	IEA
GO:0005840 [list] [network] ribosome	(1110 genes)	IEA

GO MF

GO:0008097 [list] [network] 5S rRNA binding	(37 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(1075 genes)	IEA

Protein

XP_016677525.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 3, nucl 1

(predict for XP_016677525.1)

Subcellular
localization
TargetP

mito 7, other 4

(predict for XP_016677525.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107896769	ath-u.5 for ATL5	ath-u.5 for RPL5B	gma-u.5 for 100817746	gma-u.5 for 100805868	gma-u.5 for 100786189	vvi-u.5 for 100242372	vvi-u.5 for 100262824	ppo-u.5 for 18108544	ppo-u.5 for 7469360	ppo-u.5 for 18104605	mtr-u.5 for 11411613	mtr-u.5 for 25500767	sly-u.5 for 101262823	sly-u.5 for 101253089	sly-u.5 for 101245873	osa-u.5 for 4325100	osa-u.5 for 9271934	zma-u.5 for 103650892	zma-u.5 for 100284917	zma-u.5 for 103631647

Ortholog

Ortholog ID: 2223

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107954724

LOC107914591

ATL5

RPL5B

Function^*

60S ribosomal protein L5

ribosomal protein L5

ribosomal protein L5 B

60S ribosomal protein L5-1

60S ribosomal protein L5-2-like

60S ribosomal protein L5-1

60S ribosomal protein L5

large ribosomal subunit protein uL18

60S ribosomal protein L5

60S ribosomal protein L5-2

large ribosomal subunit protein uL18

60S ribosomal protein L5-like

uncharacterized LOC102577675

60S ribosomal protein L5-like

large ribosomal subunit protein uL18-like

large ribosomal subunit protein uL18

60S ribosomal protein L5-2-like

60S ribosomal protein L5-1-like

60S ribosomal protein L5-1

60S ribosomal protein L5-1-like

60S ribosomal protein L5-1

ribosomal protein L5

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	11
cit00970	Aminoacyl-tRNA biosynthesis	2
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	12
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	14
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	14
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	6
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17
tae00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	7
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18
sbi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

107954724

107914591

822138

833970

103860287

103828552

111198720

106390803

102618756

102627525

100785668

100786189

100262824

100242372

18104605

7469360

25500767

11411613

101245873

101253089

102577675

102594641

142179389

107784297

9271934

4325100

103631647

103650892

123045417

123104893

123426672

123452092

8056106

8085680

100839469

100833119

5715904

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	2	3	2	3	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107896769 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107896769 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**