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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897091   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   121203508   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   OVA4   Nucleotidylyl transferase superfamily protein 
 bra-r.6   103864695   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103857114   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106390850   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106397343   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106437554   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102623930   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100780447   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100780314   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100262715   tryptophanyl-tRNA synthetase-like 
 ppo-u.5   7497563   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25490146   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101244069   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102598687   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107791065   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107775100   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4326551   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100272291   uncharacterized LOC100272291 
 tae-r.2   123070641   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123079054   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123444381   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8062172   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 bdi-r.1   100826862   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_05g238322v5   uncharacterized protein 

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Top 50 coexpressed genes to 107897091 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897091 (ghi-r.1 coexpression data)

CoexMap"107897091"


ghiLOC107897091 | Entrez gene ID : 107897091    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 1 1 1 2 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00970 [list] [network] Aminoacyl-tRNA biosynthesis (172 genes)
GO BP
GO:0006436 [list] [network] tryptophanyl-tRNA aminoacylation  (7 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0004830 [list] [network] tryptophan-tRNA ligase activity  (7 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040971682.1 [sequence] [blastp]
XP_040971683.1 [sequence] [blastp]
XP_040971684.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_040971682.1)
chlo 9  (predict for XP_040971683.1)
chlo 8,  mito 1  (predict for XP_040971684.1)
Subcellular
localization
TargetP
chlo 6,  mito 6  (predict for XP_040971682.1)
mito 6,  chlo 5  (predict for XP_040971683.1)
mito 5  (predict for XP_040971684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897091
ghi-r.1
for
121203508
ath-u.5
for
OVA4
bra-r.6
for
103864695
bra-r.6
for
103857114
bna-r.1
for
106390850
bna-r.1
for
106397343
bna-r.1
for
106437554
cit-r.1
for
102623930
gma-u.5
for
100780447
gma-u.5
for
100780314
vvi-u.5
for
100262715
ppo-u.5
for
7497563
mtr-u.5
for
25490146
sly-u.5
for
101244069
sot-r.1
for
102598687
nta-r.1
for
107791065
nta-r.1
for
107775100
osa-u.5
for
4326551
zma-u.5
for
100272291
tae-r.2
for
123070641
tae-r.2
for
123079054
hvu-r.1
for
123444381
sbi-r.1
for
8062172
bdi-r.1
for
100826862
cre-r.1
for
CHLRE_05g238322v5


Ortholog ID: 8887
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107897091 LOC121203508 OVA4 LOC103864695 LOC103857114 LOC106390850 LOC106397343 LOC106437554 LOC102623930 LOC100780447 LOC100780314 LOC100262715 LOC7497563 LOC25490146 LOC101244069 LOC102598687 LOC107791065 LOC107775100 LOC4326551 LOC100272291 LOC123070641 LOC123079054 LOC123444381 LOC8062172 LOC100826862 CHLRE_05g238322v5
Function* tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial Nucleotidylyl transferase superfamily protein tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophanyl-tRNA synthetase-like tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100272291 tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03018 RNA degradation 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00230 Purine metabolism 2
bra00730 Thiamine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna01240 Biosynthesis of cofactors 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna01240 Biosynthesis of cofactors 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00230 Purine metabolism 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03420 Nucleotide excision repair 3
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
osa00970 Aminoacyl-tRNA biosynthesis 2
osa03010 Ribosome 2
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 11
tae00450 Selenocompound metabolism 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 11
tae00450 Selenocompound metabolism 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 6
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897091 121203508 817126 103864695 103857114 106390850 106397343 106437554 102623930 100780447 100780314 100262715 7497563 25490146 101244069 102598687 107791065 107775100 4326551 100272291 123070641 123079054 123444381 8062172 100826862 5723283
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