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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901078   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 ath-u.5   SHH1   SAWADEE HOMEODOMAIN protein 
 gma-u.5   100817690   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 gma-u.5   100801021   protein SAWADEE HOMEODOMAIN HOMOLOG 2 
 gma-u.5   100799110   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 vvi-u.5   100245843   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 vvi-u.5   100258357   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 ppo-u.5   7470578   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 ppo-u.5   7476692   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 mtr-u.5   25500348   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 mtr-u.5   25490138   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 sly-u.5   101249746   protein SAWADEE HOMEODOMAIN HOMOLOG 2-like 
 sly-u.5   101246504   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 sly-u.5   101256958   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 osa-u.5   4346807   protein SAWADEE HOMEODOMAIN HOMOLOG 1 
 zma-u.5   100192562   uncharacterized LOC100192562 

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Top 50 coexpressed genes to 107901078 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901078 (ghi-r.1 coexpression data)

CoexMap"107901078"


ghiLOC107901078 | Entrez gene ID : 107901078    
Species ghi ath gma vvi ppo mtr sly osa zma tae hvu bdi cit bra cre sbi bna nta sot
Paralog 1 1 3 2 2 2 3 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016682417.2 [sequence] [blastp]
XP_016682418.2 [sequence] [blastp]
XP_016682419.2 [sequence] [blastp]
XP_016682421.2 [sequence] [blastp]
XP_016682422.1 [sequence] [blastp]
XP_040951279.1 [sequence] [blastp]
XP_040951280.1 [sequence] [blastp]
XP_040951281.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_016682417.2)
nucl 4,  chlo 4,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_016682418.2)
chlo 5,  nucl 5  (predict for XP_016682419.2)
chlo 5,  nucl 5  (predict for XP_016682421.2)
chlo 5,  nucl 4,  cyto 1,  extr 1  (predict for XP_016682422.1)
nucl 5,  chlo 4,  plas 1,  extr 1  (predict for XP_040951279.1)
chlo 5,  nucl 5  (predict for XP_040951280.1)
chlo 6,  nucl 4  (predict for XP_040951281.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016682417.2)
mito 6  (predict for XP_016682418.2)
other 5  (predict for XP_016682419.2)
other 5  (predict for XP_016682421.2)
other 5  (predict for XP_016682422.1)
mito 7  (predict for XP_040951279.1)
other 5  (predict for XP_040951280.1)
other 5  (predict for XP_040951281.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901078

.
ath-u.5
for
SHH1

.
gma-u.5
for
100817690

.
gma-u.5
for
100801021

.
gma-u.5
for
100799110

.
vvi-u.5
for
100245843

.
vvi-u.5
for
100258357

.
ppo-u.5
for
7470578

.
ppo-u.5
for
7476692

.
mtr-u.5
for
25500348

.
mtr-u.5
for
25490138

.
sly-u.5
for
101249746

.
sly-u.5
for
101246504

.
sly-u.5
for
101256958

.
osa-u.5
for
4346807

.
zma-u.5
for
100192562

.


Ortholog ID: 3997
Species ath gma gma sly sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol SHH1 LOC100817690 LOC100800332 LOC101246504 LOC101249746 LOC4346807 LOC100192562 LOC103872312 LOC100258357 LOC100245843 LOC7476692 LOC7470578 LOC25500348 LOC25490138 LOC123103535 LOC123111751 LOC123452649 LOC107897346 LOC107897093 LOC106452085 LOC106346679 LOC8054600 LOC102583573 LOC102579829 LOC102626883 LOC102608072 LOC100829241 LOC107785022 LOC107803460
Function* SAWADEE HOMEODOMAIN protein protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like protein SAWADEE HOMEODOMAIN HOMOLOG 1 uncharacterized LOC100192562 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 2 protein SAWADEE HOMEODOMAIN HOMOLOG 2 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 2 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 2 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like protein SAWADEE HOMEODOMAIN HOMOLOG 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03420 Nucleotide excision repair 4
tae04016 MAPK signaling pathway - plant 2
tae04070 Phosphatidylinositol signaling system 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00020 Citrate cycle (TCA cycle) 4
tae00620 Pyruvate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
ghi00240 Pyrimidine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00010 Glycolysis / Gluconeogenesis 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot04145 Phagosome 3
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838088 100817690 100800332 101246504 101249746 4346807 100192562 103872312 100258357 100245843 7476692 7470578 25500348 25490138 123103535 123111751 123452649 107897346 107897093 106452085 106346679 8054600 102583573 102579829 102626883 102608072 100829241 107785022 107803460
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