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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107902204   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 ath-u.5   APG1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   100788766   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 gma-u.5   100806615   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 gma-u.5   100783986   37 kDa inner envelope membrane protein, chloroplastic-like 
 vvi-u.5   100240861   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 vvi-u.5   100266496   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 ppo-u.5   7480667   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 ppo-u.5   7473437   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 ppo-u.5   7476869   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 mtr-u.5   25484476   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 mtr-u.5   11429739   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 sly-u.5   101267644   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 sly-u.5   101255662   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 
 osa-u.5   107277102   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 1, chloroplastic-like 
 osa-u.5   4352791   2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic-like 
 zma-u.5   100284931   uncharacterized LOC100284931 

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Top 50 coexpressed genes to 107902204 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107902204 (ghi-r.1 coexpression data)

CoexMap"107902204"


ghiLOC107902204 | Entrez gene ID : 107902204    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 3 2 3 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (102 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0032259 [list] [network] methylation  (352 genes)  IEA  
GO CC
GO MF
GO:0051741 [list] [network] 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity  (8 genes)  IEA  
Protein XP_016683934.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016683934.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_016683934.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107902204
ath-u.5
for
APG1
gma-u.5
for
100788766
gma-u.5
for
100806615
gma-u.5
for
100783986
vvi-u.5
for
100240861
vvi-u.5
for
100266496
ppo-u.5
for
7480667
ppo-u.5
for
7473437
ppo-u.5
for
7476869
mtr-u.5
for
25484476
mtr-u.5
for
11429739
sly-u.5
for
101267644
sly-u.5
for
101255662
osa-u.5
for
107277102
osa-u.5
for
4352791
zma-u.5
for
100284931


Ortholog ID: 3243
Species ghi ghi ath bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107915302 LOC107924562 APG1 LOC103830388 LOC106410579 LOC106353332 LOC102614553 LOC102630396 LOC100788766 LOC100783986 LOC100266496 LOC100240861 LOC7473437 LOC7480667 LOC11429739 LOC25484476 LOC101267644 LOC101255662 LOC102604412 LOC102592709 LOC107760985 LOC107814278 LOC4352791 LOC107277102 LOC100284931 LOC123087377 LOC123127840 LOC123396437 LOC123450973 LOC8071468 LOC8071470 LOC100831760 LOC100837610 CHLRE_14g625450v5
Function* 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 37 kDa inner envelope membrane protein, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 1, chloroplastic-like uncharacterized LOC100284931 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 1, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic-like 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath01230 Biosynthesis of amino acids 5
ath00710 Carbon fixation by Calvin cycle 4
ath03010 Ribosome 4
ath00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00785 Lipoic acid metabolism 3
bra01240 Biosynthesis of cofactors 2
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 6
gma01200 Carbon metabolism 6
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00710 Carbon fixation by Calvin cycle 4
gma00620 Pyruvate metabolism 3
gma00010 Glycolysis / Gluconeogenesis 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 7
vvi00710 Carbon fixation by Calvin cycle 5
vvi01240 Biosynthesis of cofactors 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 6
ppo03010 Ribosome 3
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00860 Porphyrin metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr01200 Carbon metabolism 3
mtr00710 Carbon fixation by Calvin cycle 2
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly00010 Glycolysis / Gluconeogenesis 2
sly00620 Pyruvate metabolism 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly00260 Glycine, serine and threonine metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
sot01230 Biosynthesis of amino acids 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00860 Porphyrin metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00710 Carbon fixation by Calvin cycle 5
osa01230 Biosynthesis of amino acids 5
osa03010 Ribosome 4
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00910 Nitrogen metabolism 2
osa01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
zma00061 Fatty acid biosynthesis 2
zma01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00460 Cyanoamino acid metabolism 2
tae00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 3
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00250 Alanine, aspartate and glutamate metabolism 4
bdi00410 beta-Alanine metabolism 4
bdi00430 Taurine and hypotaurine metabolism 4
bdi00650 Butanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
bdi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107915302 107924562 825516 103830388 106410579 106353332 102614553 102630396 100788766 100783986 100266496 100240861 7473437 7480667 11429739 25484476 101267644 101255662 102604412 102592709 107760985 107814278 4352791 107277102 100284931 123087377 123127840 123396437 123450973 8071468 8071470 100831760 100837610 5718296
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