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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107902738   pentatricopeptide repeat-containing protein At2g28050 
 ath-u.5   AT2G28050   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT2G32630   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100789169   pentatricopeptide repeat-containing protein At2g32630 
 vvi-u.5   100251700   pentatricopeptide repeat-containing protein At2g32630 
 ppo-u.5   18111176   pentatricopeptide repeat-containing protein At2g32630 
 mtr-u.5   11434014   pentatricopeptide repeat-containing protein At2g32630 
 sly-u.5   109121368   pentatricopeptide repeat-containing protein At2g32630 

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Top 50 coexpressed genes to 107902738 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107902738 (ghi-r.1 coexpression data)

CoexMap"107902738"


ghiLOC107902738 | Entrez gene ID : 107902738    
Species ghi ath gma vvi ppo mtr sly hvu zma bna cit bra osa sbi bdi nta tae cre sot
Paralog 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016684352.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_016684352.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_016684352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107902738
ath-u.5
for
AT2G28050
ath-u.5
for
AT2G32630
gma-u.5
for
100789169
vvi-u.5
for
100251700
ppo-u.5
for
18111176
mtr-u.5
for
11434014
sly-u.5
for
109121368


Ortholog ID: 10680
Species ghi ghi ath ath bra bna bna cit gma vvi ppo mtr sly sot sot nta nta
Symbol LOC107902738 LOC107892510 AT2G32630 AT2G28050 LOC103857433 LOC125604629 LOC106437762 LOC102607920 LOC100789169 LOC100251700 LOC18111176 LOC11434014 LOC109121368 LOC102578360 LOC102579684 LOC107772459 LOC107762777
Function* pentatricopeptide repeat-containing protein At2g28050 pentatricopeptide repeat-containing protein At2g32630 Pentatricopeptide repeat (PPR-like) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630-like pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g32630 pentatricopeptide repeat-containing protein At2g28050 uncharacterized LOC107772459 uncharacterized LOC107762777
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04122 Sulfur relay system 5
ghi00730 Thiamine metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03022 Basal transcription factors 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107902738 107892510 817823 817349 103857433 125604629 106437762 102607920 100789169 100251700 18111176 11434014 109121368 102578360 102579684 107772459 107762777
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