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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107904483   ubiquitin-conjugating enzyme E2 4 
 ath-u.5   UBC6   ubiquitin-conjugating enzyme 6 
 ath-u.5   UBC4   ubiquitin conjugating enzyme 4 
 ath-u.5   UBC5   ubiquitin-conjugating enzyme 5 
 gma-u.5   100527526   putative ubiquitin-conjugating enzyme 
 gma-u.5   100812138   ubiquitin-conjugating enzyme E2 4 
 gma-u.5   100527756   uncharacterized LOC100527756 
 vvi-u.5   100250088   ubiquitin-conjugating enzyme E2-23 kDa 
 vvi-u.5   100244806   ubiquitin-conjugating enzyme E2-23 kDa 
 vvi-u.5   100253472   ubiquitin-conjugating enzyme E2 5 
 ppo-u.5   7457348   ubiquitin-conjugating enzyme E2 4 
 ppo-u.5   7472757   ubiquitin-conjugating enzyme E2 4 
 ppo-u.5   7496982   ubiquitin-conjugating enzyme E2-23 kDa 
 mtr-u.5   25500869   ubiquitin-conjugating enzyme E2 5 
 mtr-u.5   25502069   ubiquitin-conjugating enzyme E2 5 
 sly-u.5   101254242   ubiquitin-conjugating enzyme E2-23 kDa 
 sly-u.5   101265863   ubiquitin-conjugating enzyme E2-23 kDa 
 sly-u.5   101261295   ubiquitin-conjugating enzyme E2-23 kDa 
 osa-u.5   4348755   ubiquitin-conjugating enzyme E2 4 
 zma-u.5   115565779   ubiquitin-conjugating enzyme family 
 zma-u.5   100857003   ubiquitin-conjugating enzyme E2-21 kDa 1 
 zma-u.5   100194405   putative ubiquitin-conjugating enzyme family 

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Top 50 coexpressed genes to 107904483 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107904483 (ghi-r.1 coexpression data)

CoexMap"107904483"


ghiLOC107904483 | Entrez gene ID : 107904483    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 3 3 3 2 3 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_016686358.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_016686358.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016686358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107904483
ath-u.5
for
UBC6
ath-u.5
for
UBC4
ath-u.5
for
UBC5
gma-u.5
for
100527526
gma-u.5
for
100812138
gma-u.5
for
100527756
vvi-u.5
for
100250088
vvi-u.5
for
100244806
vvi-u.5
for
100253472
ppo-u.5
for
7457348
ppo-u.5
for
7472757
ppo-u.5
for
7496982
mtr-u.5
for
25500869
mtr-u.5
for
25502069
sly-u.5
for
101254242
sly-u.5
for
101265863
sly-u.5
for
101261295
osa-u.5
for
4348755
zma-u.5
for
115565779
zma-u.5
for
100857003
zma-u.5
for
100194405


Ortholog ID: 1076
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107947039 LOC107922740 UBC6 UBC4 LOC103864075 LOC103858201 LOC125575681 LOC125607946 LOC127900532 LOC102610071 LOC100791133 LOC100804969 LOC100253472 LOC100244806 LOC7496982 LOC7457348 LOC25502069 LOC101254242 LOC101253514 LOC102592309 LOC102603326 LOC107788813 LOC107794743 LOC4348755 LOC101202716 LOC100193596 LOC123123982 LOC123093519 LOC123429951 LOC123449717 LOC8059292 LOC8085479 LOC100845410 LOC100827010 CHLRE_01g027200v5
Function* ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme 6 ubiquitin conjugating enzyme 4 ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 6 ubiquitin-conjugating enzyme E2 4-like ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 5-like ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2 5 ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2-23 kDa ubiquitin-conjugating enzyme E2-23 kDa-like ubiquitin-conjugating enzyme E2 4 putative ubiquitin-conjugating enzyme family uncharacterized LOC100193596 ubiquitin-conjugating enzyme E2-23 kDa-like ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 4-like ubiquitin-conjugating enzyme E2 4-like ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 4 ubiquitin-conjugating enzyme E2 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi03083 Polycomb repressive complex 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath00100 Steroid biosynthesis 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
cit00051 Fructose and mannose metabolism 2
cit04120 Ubiquitin mediated proteolysis 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04130 SNARE interactions in vesicular transport 2
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa00600 Sphingolipid metabolism 2
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04136 Autophagy - other 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 4
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
tae04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi04144 Endocytosis 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04136 Autophagy - other 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107947039 107922740 819211 834136 103864075 103858201 125575681 125607946 127900532 102610071 100791133 100804969 100253472 100244806 7496982 7457348 25502069 101254242 101253514 102592309 102603326 107788813 107794743 4348755 101202716 100193596 123123982 123093519 123429951 123449717 8059292 8085479 100845410 100827010 5715306
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