ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107904696	uncharacterized LOC107904696
ath-u.5	AT2G40120	Protein kinase superfamily protein
ath-u.5	AT3G17750	Protein kinase superfamily protein
gma-u.5	100798608	uncharacterized LOC100798608
gma-u.5	100795722	dual specificity tyrosine-phosphorylation-regulated kinase mbk-1
gma-u.5	100786225	uncharacterized LOC100786225
vvi-u.5	100265606	serine/threonine-protein kinase ppk15
vvi-u.5	100255903	uncharacterized LOC100255903
ppo-u.5	7454018	uncharacterized LOC7454018
ppo-u.5	7474433	serine/threonine-protein kinase ppk15
ppo-u.5	18105578	uncharacterized LOC18105578
mtr-u.5	25496682	uncharacterized LOC25496682
mtr-u.5	11425552	DYRK-family kinase pom1
sly-u.5	101245853	uncharacterized LOC101245853
sly-u.5	101252371	protein kinase domain-containing protein
sly-u.5	101252694	serine/threonine-protein kinase ppk15
osa-u.5	4339052	DYRK-family kinase pom1
osa-u.5	4333928	uncharacterized LOC4333928
osa-u.5	4327402	uncharacterized LOC4327402
zma-u.5	103625933	Protein kinase superfamily protein
zma-u.5	100501203	uncharacterized LOC100501203
zma-u.5	100381461	Protein kinase superfamily protein

Top 50 coexpressed genes to 107904696 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107904696 (ghi-r.1 coexpression data)

CoexMap"107904696"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0018107 [list] [network] peptidyl-threonine phosphorylation	(27 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(258 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0004713 [list] [network] protein tyrosine kinase activity	(142 genes)	IEA
GO:0004674 [list] [network] protein serine/threonine kinase activity	(1166 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5155 genes)	IEA

Protein

XP_016686639.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016686639.2)

Subcellular
localization
TargetP

scret 4, other 3

(predict for XP_016686639.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107904696	ath-u.5 for AT2G40120	ath-u.5 for AT3G17750	gma-u.5 for 100798608	gma-u.5 for 100795722	gma-u.5 for 100786225	vvi-u.5 for 100265606	vvi-u.5 for 100255903	ppo-u.5 for 7454018	ppo-u.5 for 7474433	ppo-u.5 for 18105578	mtr-u.5 for 25496682	mtr-u.5 for 11425552	sly-u.5 for 101245853	sly-u.5 for 101252371	sly-u.5 for 101252694	osa-u.5 for 4339052	osa-u.5 for 4333928	osa-u.5 for 4327402	zma-u.5 for 103625933	zma-u.5 for 100501203	zma-u.5 for 100381461

Ortholog

Ortholog ID: 1416

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107887130

uncharacterized LOC107924545

Protein kinase superfamily protein

uncharacterized LOC103831826

serine/threonine-protein kinase ppk15

uncharacterized LOC106354284

uncharacterized LOC102628658

uncharacterized LOC102625951

uncharacterized LOC100786225

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1

serine/threonine-protein kinase ppk15

uncharacterized LOC100255903

serine/threonine-protein kinase ppk15

DYRK-family kinase pom1

uncharacterized LOC25496682

protein kinase domain-containing protein

serine/threonine-protein kinase ppk15

dual specificity tyrosine-phosphorylation-regulated kinase 4

uncharacterized LOC102605840

uncharacterized LOC107777685

uncharacterized LOC107780763

uncharacterized LOC4333928

DYRK-family kinase pom1

Protein kinase superfamily protein

uncharacterized LOC100279465

DYRK-family kinase pom1

cyclin-dependent kinase 11.2

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1-like

serine/threonine-protein kinase PRP4 homolog

uncharacterized LOC8059994

serine/threonine-protein kinase ppk15

probable serine/threonine-protein kinase yakA

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2
vvi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04148	Efferocytosis	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly03420	Nucleotide excision repair	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta03018	RNA degradation	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta00906	Carotenoid biosynthesis	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu00052	Galactose metabolism	2
hvu04626	Plant-pathogen interaction	2
hvu01240	Biosynthesis of cofactors	2
hvu00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00630	Glyoxylate and dicarboxylate metabolism	2
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107887130

107924545

821043

103831826

103866978

106450260

106354284

102628658

102625951

100786225

100795722

100265606

100255903

7474433

7488023

11425552

25496682

101252371

101252694

102600192

102605840

107777685

107780763

4333928

4339052

100381461

100279465

123136550

123071300

123445057

123444981

8059994

8057751

100827656

100828781

5725852

5725663

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	3	2	3	2	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107904696 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107904696 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**