ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107905827	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
ghi-r.1	107915056	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
ghi-r.1	107909970	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
ghi-r.1	107886610	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
ath-u.5	TPS11	trehalose phosphatase/synthase 11
ath-u.5	TPS8	trehalose-6-phosphatase synthase S8
ath-u.5	ATTPS6	UDP-Glycosyltransferase / trehalose-phosphatase family protein
bra-r.6	103837918	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
bra-r.6	103836479	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
bra-r.6	103830990	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
bna-r.1	106436223	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
bna-r.1	106353870	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like
bna-r.1	106441723	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
cit-r.1	102629877	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
cit-r.1	102626436	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
cit-r.1	102615793	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
gma-u.5	100787744	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8
gma-u.5	100782799	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
gma-u.5	100775779	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
vvi-u.5	100252552	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like
vvi-u.5	100255689	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
vvi-u.5	100259175	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
ppo-u.5	7457812	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
ppo-u.5	7455893	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
ppo-u.5	7458026	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
mtr-u.5	11428387	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
mtr-u.5	25501287	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
mtr-u.5	11406035	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
sly-u.5	101247563	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sly-u.5	101250326	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
sly-u.5	101255690	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
sot-r.1	102580076	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sot-r.1	102583599	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sot-r.1	102585196	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
nta-r.1	107826391	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
nta-r.1	107762801	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
nta-r.1	107766640	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
osa-u.5	4324621	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
osa-u.5	4345573	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
zma-u.5	100501482	uncharacterized LOC100501482
zma-u.5	100501519	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
zma-u.5	100272531	uncharacterized LOC100272531
tae-r.2	123138946	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
tae-r.2	123121462	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
tae-r.2	123062055	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
hvu-r.1	123444408	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
hvu-r.1	123452519	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sbi-r.1	8067517	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sbi-r.1	8085273	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
sbi-r.1	8082723	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
bdi-r.1	100821815	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
bdi-r.1	100844084	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
bdi-r.1	100841352	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8
cre-r.1	CHLRE_06g278221v5	uncharacterized protein

Top 50 coexpressed genes to 107905827 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107905827 (ghi-r.1 coexpression data)

CoexMap"107905827"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00500 [list] [network] Starch and sucrose metabolism (349 genes)

GO BP

GO:0005992 [list] [network] trehalose biosynthetic process

(49 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(2580 genes)

IEA

GO MF

GO:0004805 [list] [network] trehalose-phosphatase activity

(48 genes)

IEA

Protein

XP_016688083.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 2

(predict for XP_016688083.2)

Subcellular
localization
TargetP

other 4

(predict for XP_016688083.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107905827	ghi-r.1 for 107915056	ghi-r.1 for 107909970	ghi-r.1 for 107886610	ath-u.5 for TPS11	ath-u.5 for TPS8	ath-u.5 for ATTPS6	bra-r.6 for 103837918	bra-r.6 for 103836479	bra-r.6 for 103830990	bna-r.1 for 106436223	bna-r.1 for 106353870	bna-r.1 for 106441723	cit-r.1 for 102629877	cit-r.1 for 102626436	cit-r.1 for 102615793	gma-u.5 for 100787744	gma-u.5 for 100782799	gma-u.5 for 100775779	vvi-u.5 for 100252552	vvi-u.5 for 100255689	vvi-u.5 for 100259175	ppo-u.5 for 7457812	ppo-u.5 for 7455893	ppo-u.5 for 7458026	mtr-u.5 for 11428387	mtr-u.5 for 25501287	mtr-u.5 for 11406035	sly-u.5 for 101247563	sly-u.5 for 101250326	sly-u.5 for 101255690	sot-r.1 for 102580076	sot-r.1 for 102583599	sot-r.1 for 102585196	nta-r.1 for 107826391	nta-r.1 for 107762801	nta-r.1 for 107766640	osa-u.5 for 4324621	osa-u.5 for 4345573	zma-u.5 for 100501482	zma-u.5 for 100501519	zma-u.5 for 100272531	tae-r.2 for 123138946	tae-r.2 for 123121462	tae-r.2 for 123062055	hvu-r.1 for 123444408	hvu-r.1 for 123452519	sbi-r.1 for 8067517	sbi-r.1 for 8085273	sbi-r.1 for 8082723	bdi-r.1 for 100821815	bdi-r.1 for 100844084	bdi-r.1 for 100841352	cre-r.1 for CHLRE_06g278221v5

Ortholog

Ortholog ID: 237

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107886610

LOC107886340

LOC107909640

TPS11

TPS10

TPS7

Function^*

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

trehalose phosphatase/synthase 11

trehalose phosphate synthase

trehalose-phosphatase/synthase 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

putative trehalose phosphatase/synthase family protein

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00100	Steroid biosynthesis	2
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00440	Phosphonate and phosphinate metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	4
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2
ath04517	IgSF CAM signaling	2
ath04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra03050	Proteasome	3
bra04120	Ubiquitin mediated proteolysis	2
bra01200	Carbon metabolism	2
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7
bna00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00230	Purine metabolism	2
gma00232	Caffeine metabolism	2
gma01232	Nucleotide metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	4
gma00640	Propanoate metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi00500	Starch and sucrose metabolism	2
vvi04075	Plant hormone signal transduction	2
vvi00053	Ascorbate and aldarate metabolism	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00250	Alanine, aspartate and glutamate metabolism	2
vvi04016	MAPK signaling pathway - plant	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01250	Biosynthesis of nucleotide sugars	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	6
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma00500	Starch and sucrose metabolism	2
zma00380	Tryptophan metabolism	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00051	Fructose and mannose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	6
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

107886610

107886340

107909640

816385

842309

837152

103836479

103862621

103852641

111213570

106440216

106415110

102626436

102612059

102611843

100787744

100800847

100810498

100259175

100253824

100246842

7457812

7462667

7465995

11428387

25501287

25482569

101255690

101259279

101262611

102583599

102586120

107058011

107825166

107810838

107808783

4324621

4346917

4324423

100501519

100191265

109942025

123062055

123079168

123182644

123447107

123406139

8085273

8082723

8075095

100821815

100844084

100829189

5723623

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	2	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107905827 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107905827 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**