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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TPS11   trehalose phosphatase/synthase 11 
 ath-r.7   TPS11   trehalose phosphatase/synthase 11 
 ath-m.9   TPS11   trehalose phosphatase/synthase 11 
 ath-e.2   TPS11   trehalose phosphatase/synthase 11 
 ath-m.4.bio   TPS11   trehalose phosphatase/synthase 11 
 ath-m.4.hor   TPS11   trehalose phosphatase/synthase 11 
 ath-m.4.lig   TPS11   trehalose phosphatase/synthase 11 
 ath-m.4.str   TPS11   trehalose phosphatase/synthase 11 
 ath-m.4.tis   TPS11   trehalose phosphatase/synthase 11 
 ath-u.5   TPS5   trehalose phosphatase/synthase 5 
 ath-u.5   TPS7   trehalose-phosphatase/synthase 7 
 ath-u.5   TPS9   trehalose-phosphatase/synthase 9 
 gma-u.5   100787744   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 
 gma-u.5   100782799   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 
 gma-u.5   100775779   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 
 vvi-u.5   100246842   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 
 vvi-u.5   100252552   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like 
 vvi-u.5   100265140   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 
 ppo-u.5   7458026   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 
 ppo-u.5   7455893   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 
 ppo-u.5   7457812   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 
 mtr-u.5   25501287   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 
 mtr-u.5   11428387   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 
 mtr-u.5   11406035   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 
 sly-u.5   101259279   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 
 sly-u.5   101262611   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 
 sly-u.5   101255690   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 
 osa-u.5   4330971   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 
 osa-u.5   4346981   alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 
 zma-u.5   100281927   uncharacterized LOC100281927 
 zma-u.5   100501482   uncharacterized LOC100501482 
 zma-u.5   103651208   probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 

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Top 50 coexpressed genes to TPS11 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TPS11 (ath-u.5 coexpression data)

CoexMap"816385"


athTPS11 | Entrez gene ID : 816385      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 12 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00500 [list] [network] Starch and sucrose metabolism (172 genes)
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003825 [list] [network] alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity  (11 genes)  IMP  
GO:0004805 [list] [network] trehalose-phosphatase activity  (12 genes)  IMP  
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISS  
Protein NP_179460.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  vacu 1,  golg 1,  cysk_plas 1  (predict for NP_179460.1)
Subcellular
localization
TargetP
other 8  (predict for NP_179460.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TPS11

.
ath-r.7
for
TPS11

.
ath-m.9
for
TPS11

.
ath-e.2
for
TPS11

.
ath-m.4.bio
for
TPS11

.
ath-m.4.hor
for
TPS11

.
ath-m.4.lig
for
TPS11

.
ath-m.4.str
for
TPS11

.
ath-m.4.tis
for
TPS11

.
ath-u.5
for
TPS5

.
ath-u.5
for
TPS7

.
ath-u.5
for
TPS9

.
gma-u.5
for
100787744

.
gma-u.5
for
100782799

.
gma-u.5
for
100775779

.
vvi-u.5
for
100246842

.
vvi-u.5
for
100252552

.
vvi-u.5
for
100265140

.
ppo-u.5
for
7458026

.
ppo-u.5
for
7455893

.
ppo-u.5
for
7457812

.
mtr-u.5
for
25501287

.
mtr-u.5
for
11428387

.
mtr-u.5
for
11406035

.
sly-u.5
for
101259279

.
sly-u.5
for
101262611

.
sly-u.5
for
101255690

.
osa-u.5
for
4330971

.
osa-u.5
for
4346981

.
zma-u.5
for
100281927

.
zma-u.5
for
100501482

.
zma-u.5
for
103651208

.


Ortholog ID: 237
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol TPS11 TPS7 LOC100810498 LOC100787744 LOC101255690 LOC101259279 LOC4324621 LOC4346917 LOC109942025 LOC100501519 LOC103836479 LOC103862621 LOC100246842 LOC100259175 LOC7462667 LOC7465995 LOC11428387 LOC25482569 LOC123079168 LOC123062055 LOC123406139 LOC107886340 LOC107909640 LOC111213570 LOC106415110 CHLRE_06g278221v5 LOC8085273 LOC8082723 LOC102586120 LOC102583599 LOC102612059 LOC102611843 LOC100829189 LOC100844084 LOC107825166 LOC107808783
Function* trehalose phosphatase/synthase 11 trehalose-phosphatase/synthase 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 uncharacterized protein alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
gma00640 Propanoate metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00230 Purine metabolism 2
gma00232 Caffeine metabolism 2
gma01232 Nucleotide metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 6
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma00500 Starch and sucrose metabolism 2
zma00380 Tryptophan metabolism 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03050 Proteasome 3
bra04120 Ubiquitin mediated proteolysis 2
bra01200 Carbon metabolism 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi04016 MAPK signaling pathway - plant 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00051 Fructose and mannose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816385 837152 100810498 100787744 101255690 101259279 4324621 4346917 109942025 100501519 103836479 103862621 100246842 100259175 7462667 7465995 11428387 25482569 123079168 123062055 123406139 107886340 107909640 111213570 106415110 5723623 8085273 8082723 102586120 102583599 102612059 102611843 100829189 100844084 107825166 107808783
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