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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107906390   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 ath-u.5   HCF173   high chlorophyll fluorescence phenotype 173 
 gma-u.5   100811347   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 gma-u.5   100779812   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 vvi-u.5   100256501   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 ppo-u.5   7497749   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 ppo-u.5   18104727   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 mtr-u.5   11428397   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 sly-u.5   101263137   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 osa-u.5   4328240   uncharacterized LOC4328240 
 osa-u.5   4341998   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic 
 zma-u.5   100501691   uncharacterized LOC100501691 

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Top 50 coexpressed genes to 107906390 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107906390 (ghi-r.1 coexpression data)

CoexMap"107906390"


ghiLOC107906390 | Entrez gene ID : 107906390    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016688859.2 [sequence] [blastp]
XP_016688860.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_016688859.2)
chlo 9,  chlo_mito 5  (predict for XP_016688860.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016688859.2)
chlo 8  (predict for XP_016688860.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107906390
ath-u.5
for
HCF173
gma-u.5
for
100811347
gma-u.5
for
100779812
vvi-u.5
for
100256501
ppo-u.5
for
7497749
ppo-u.5
for
18104727
mtr-u.5
for
11428397
sly-u.5
for
101263137
osa-u.5
for
4328240
osa-u.5
for
4341998
zma-u.5
for
100501691


Ortholog ID: 8699
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC121229323 LOC107906390 HCF173 LOC103872461 BNAC05G12780D LOC106346749 LOC102624935 LOC100779812 LOC100811347 LOC100256501 LOC7497749 LOC18104727 LOC11428397 LOC101263137 LOC102591205 LOC107798300 LOC107798218 LOC4328240 LOC4341998 LOC100501691 LOC123148589 LOC123156704 LOC123412252 LOC8064953 LOC8057542 LOC100843331 CHLRE_13g578650v5
Function* protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic high chlorophyll fluorescence phenotype 173 protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic uncharacterized LOC102591205 protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic-like protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic uncharacterized LOC4328240 protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic uncharacterized LOC100501691 protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic uncharacterized LOC8064953 uncharacterized LOC8057542 uncharacterized LOC100843331 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121229323 107906390 838243 103872461 106365586 106346749 102624935 100779812 100811347 100256501 7497749 18104727 11428397 101263137 102591205 107798300 107798218 4328240 4341998 100501691 123148589 123156704 123412252 8064953 8057542 100843331 5719281
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