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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907242   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 ath-u.5   CRR21   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806010   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 vvi-u.5   100261119   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 ppo-u.5   7484690   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 mtr-u.5   112416094   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 sly-u.5   101245567   pentatricopeptide repeat-containing protein 
 osa-u.5   4327722   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 
 zma-u.5   103636058   pentatricopeptide repeat-containing protein At5g55740, chloroplastic 

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Top 50 coexpressed genes to 107907242 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907242 (ghi-r.1 coexpression data)

CoexMap"107907242"


ghiLOC107907242 | Entrez gene ID : 107907242    
Species ghi ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi cre bna nta bdi bra
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016690012.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_016690012.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016690012.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907242

.
ath-u.5
for
CRR21

.
gma-u.5
for
100806010

.
vvi-u.5
for
100261119

.
ppo-u.5
for
7484690

.
mtr-u.5
for
112416094

.
sly-u.5
for
101245567

.
osa-u.5
for
4327722

.
zma-u.5
for
103636058

.


Ortholog ID: 11448
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CRR21 LOC100806010 LOC101245567 LOC4327722 LOC103636058 LOC103845020 LOC100261119 LOC7484690 LOC112416094 LOC123070087 LOC123078538 LOC123439952 LOC107907425 LOC107907242 LOC106390890 LOC106401991 LOC8082521 LOC102598740 LOC112495469 LOC100836548 LOC107830848 LOC107785888
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835668 100806010 101245567 4327722 103636058 103845020 100261119 7484690 112416094 123070087 123078538 123439952 107907425 107907242 106390890 106401991 8082521 102598740 112495469 100836548 107830848 107785888
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