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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907354   nifU-like protein 3, chloroplastic 
 ghi-r.1   107907499   nifU-like protein 3, chloroplastic 
 ath-u.5   NFU3   NFU domain protein 3 
 bra-r.6   103863702   nifU-like protein 3, chloroplastic 
 bna-r.1   106444658   nifU-like protein 3, chloroplastic 
 bna-r.1   125580155   nifU-like protein 3, chloroplastic 
 cit-r.1   102616867   nifU-like protein 3, chloroplastic 
 gma-u.5   100807119   nifU-like protein 3, chloroplastic 
 gma-u.5   100806364   nifU-like protein 3, chloroplastic 
 vvi-u.5   100266735   nifU-like protein 3, chloroplastic 
 ppo-u.5   18100475   nifU-like protein 3, chloroplastic 
 mtr-u.5   11437666   nifU-like protein 3, chloroplastic 
 sly-u.5   101247026   nifU-like protein 3, chloroplastic 
 sot-r.1   102586740   nifU-like protein 3, chloroplastic 
 nta-r.1   107759343   nifU-like protein 3, chloroplastic 
 nta-r.1   107794202   nifU-like protein 3, chloroplastic 
 osa-u.5   4341928   nifU-like protein 3, chloroplastic 
 zma-u.5   100284426   uncharacterized LOC100284426 
 tae-r.2   123148763   nifU-like protein 3, chloroplastic 
 tae-r.2   123156612   nifU-like protein 3, chloroplastic 
 tae-r.2   123164221   nifU-like protein 3, chloroplastic 
 hvu-r.1   123413329   nifU-like protein 3, chloroplastic 
 sbi-r.1   8065122   nifU-like protein 3, chloroplastic 
 bdi-r.1   100833861   nifU-like protein 3, chloroplastic 

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Top 50 coexpressed genes to 107907354 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907354 (ghi-r.1 coexpression data)

CoexMap"107907354"


ghiLOC107907354 | Entrez gene ID : 107907354    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (65 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (302 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (90 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (898 genes)  IEA  
Protein XP_040948904.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_040948904.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_040948904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907354
ghi-r.1
for
107907499
ath-u.5
for
NFU3
bra-r.6
for
103863702
bna-r.1
for
106444658
bna-r.1
for
125580155
cit-r.1
for
102616867
gma-u.5
for
100807119
gma-u.5
for
100806364
vvi-u.5
for
100266735
ppo-u.5
for
18100475
mtr-u.5
for
11437666
sly-u.5
for
101247026
sot-r.1
for
102586740
nta-r.1
for
107759343
nta-r.1
for
107794202
osa-u.5
for
4341928
zma-u.5
for
100284426
tae-r.2
for
123148763
tae-r.2
for
123156612
tae-r.2
for
123164221
hvu-r.1
for
123413329
sbi-r.1
for
8065122
bdi-r.1
for
100833861


Ortholog ID: 10881
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107907354 LOC107907499 NFU3 LOC103863702 LOC106444658 LOC125580155 LOC102616867 LOC100807119 LOC100806364 LOC100266735 LOC18100475 LOC11437666 LOC101247026 LOC102586740 LOC107759343 LOC107794202 LOC4341928 LOC100284426 LOC123148763 LOC123156612 LOC123164221 LOC123413329 LOC8065122 LOC100833861
Function* nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic NFU domain protein 3 nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic uncharacterized LOC100284426 nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic nifU-like protein 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit00710 Carbon fixation by Calvin cycle 5
cit00630 Glyoxylate and dicarboxylate metabolism 4
cit00195 Photosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 4
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907354 107907499 828697 103863702 106444658 125580155 102616867 100807119 100806364 100266735 18100475 11437666 101247026 102586740 107759343 107794202 4341928 100284426 123148763 123156612 123164221 123413329 8065122 100833861
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