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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907409   E3 ubiquitin-protein ligase UPL5 
 ath-u.5   UPL5   ubiquitin protein ligase 5 
 gma-u.5   100789233   E3 ubiquitin-protein ligase UPL5 
 gma-u.5   100801584   E3 ubiquitin-protein ligase UPL5 
 gma-u.5   100796470   E3 ubiquitin-protein ligase UPL5 
 vvi-u.5   100244983   E3 ubiquitin-protein ligase UPL5 
 ppo-u.5   7463675   E3 ubiquitin-protein ligase UPL5 
 ppo-u.5   7484029   E3 ubiquitin-protein ligase UPL5 
 ppo-u.5   7455828   E3 ubiquitin-protein ligase UPL5 
 mtr-u.5   11410735   E3 ubiquitin-protein ligase UPL5 
 sly-u.5   101244540   E3 ubiquitin-protein ligase UPL5-like 
 osa-u.5   4347416   E3 ubiquitin-protein ligase UPL5 
 zma-u.5   100279774   uncharacterized LOC100279774 
 zma-u.5   100501539   E3 ubiquitin-protein ligase UPL5 

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Top 50 coexpressed genes to 107907409 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907409 (ghi-r.1 coexpression data)

CoexMap"107907409"


ghiLOC107907409 | Entrez gene ID : 107907409    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 3 1 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016690270.2 [sequence] [blastp]
XP_016690271.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_016690270.2)
nucl 8,  cyto 1  (predict for XP_016690271.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016690270.2)
other 9  (predict for XP_016690271.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907409

.
ath-u.5
for
UPL5

.
gma-u.5
for
100789233

.
gma-u.5
for
100801584

.
gma-u.5
for
100796470

.
vvi-u.5
for
100244983

.
ppo-u.5
for
7463675

.
ppo-u.5
for
7484029

.
ppo-u.5
for
7455828

.
mtr-u.5
for
11410735

.
sly-u.5
for
101244540

.
osa-u.5
for
4347416

.
zma-u.5
for
100279774

.
zma-u.5
for
100501539

.


Ortholog ID: 2092
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi cit bdi bdi nta nta
Symbol UPL5 LOC100801584 LOC100796470 LOC101250305 LOC4347416 LOC100501539 LOC100279774 LOC103839878 LOC103858640 LOC100244983 LOC7455828 LOC7484029 LOC11410735 LOC123156754 LOC123150907 LOC123399336 LOC107961932 LOC107907409 LOC106381580 CHLRE_12g533750v5 LOC8055862 LOC102626250 LOC100826898 LOC100827199 LOC107822672 LOC107789421
Function* ubiquitin protein ligase 5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 uncharacterized LOC100279774 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5-like E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5-like uncharacterized protein E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5 E3 ubiquitin-protein ligase UPL5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04142 Lysosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826870 100801584 100796470 101250305 4347416 100501539 100279774 103839878 103858640 100244983 7455828 7484029 11410735 123156754 123150907 123399336 107961932 107907409 106381580 5718528 8055862 102626250 100826898 100827199 107822672 107789421
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