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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909201   uncharacterized LOC107909201 
 ath-u.5   AT2G25640   SPOC domain / Transcription elongation factor S-II protein 
 ath-u.5   AT5G11430   SPOC domain / Transcription elongation factor S-II protein 
 ath-u.5   AT5G25520   SPOC domain / Transcription elongation factor S-II protein 
 gma-u.5   100808809   death-inducer obliterator 1 
 gma-u.5   100791982   uncharacterized LOC100791982 
 vvi-u.5   100267937   uncharacterized LOC100267937 
 ppo-u.5   7471561   uncharacterized LOC7471561 
 ppo-u.5   7458998   uncharacterized LOC7458998 
 mtr-u.5   11425857   uncharacterized LOC11425857 
 sly-u.5   101249111   uncharacterized LOC101249111 
 osa-u.5   4341430   uncharacterized LOC4341430 
 osa-u.5   4328690   uncharacterized LOC4328690 
 zma-u.5   103649038   uncharacterized LOC103649038 
 zma-u.5   103627127   death-inducer obliterator 1-like 
 zma-u.5   100501569   putative SPOC domain / Transcription elongation factor S-II protein 

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Top 50 coexpressed genes to 107909201 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909201 (ghi-r.1 coexpression data)

CoexMap"107909201"


ghiLOC107909201 | Entrez gene ID : 107909201    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 2 1 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (617 genes)  IEA  
GO CC
GO MF
Protein XP_016692144.1 [sequence] [blastp]
XP_016692145.1 [sequence] [blastp]
XP_016692146.1 [sequence] [blastp]
XP_016692147.1 [sequence] [blastp]
XP_040931187.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016692144.1)
nucl 10  (predict for XP_016692145.1)
nucl 10  (predict for XP_016692146.1)
nucl 9  (predict for XP_016692147.1)
nucl 9  (predict for XP_040931187.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016692144.1)
other 7  (predict for XP_016692145.1)
other 7,  chlo 3  (predict for XP_016692146.1)
other 7  (predict for XP_016692147.1)
other 7  (predict for XP_040931187.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909201
ath-u.5
for
AT2G25640
ath-u.5
for
AT5G11430
ath-u.5
for
AT5G25520
gma-u.5
for
100808809
gma-u.5
for
100791982
vvi-u.5
for
100267937
ppo-u.5
for
7471561
ppo-u.5
for
7458998
mtr-u.5
for
11425857
sly-u.5
for
101249111
osa-u.5
for
4341430
osa-u.5
for
4328690
zma-u.5
for
103649038
zma-u.5
for
103627127
zma-u.5
for
100501569


Ortholog ID: 4873
Species ghi ghi ath ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi bdi
Symbol LOC107909201 LOC107942483 AT5G11430 AT5G25520 LOC103864683 LOC106372406 LOC106366797 LOC102629288 LOC100808809 LOC100791982 LOC100267937 LOC7458998 LOC7471561 LOC11425857 LOC101249111 LOC102580101 LOC107810211 LOC107817439 LOC4341430 LOC4328690 LOC103649038 LOC100501569 LOC123148131 LOC123143278 LOC123406265 LOC8082942 LOC100836963
Function* uncharacterized LOC107909201 uncharacterized LOC107942483 SPOC domain / Transcription elongation factor S-II protein SPOC domain / Transcription elongation factor S-II protein uncharacterized LOC103864683 uncharacterized LOC106372406 uncharacterized LOC106366797 hypothetical protein death-inducer obliterator 1 uncharacterized LOC100791982 uncharacterized LOC100267937 uncharacterized LOC7458998 uncharacterized LOC7471561 uncharacterized LOC11425857 uncharacterized LOC101249111 death-inducer obliterator 1-like uncharacterized LOC107810211 uncharacterized LOC107817439 uncharacterized LOC4341430 uncharacterized LOC4328690 uncharacterized LOC103649038 putative SPOC domain / Transcription elongation factor S-II protein uncharacterized LOC123148131 death-inducer obliterator 1 death-inducer obliterator 1 death-inducer obliterator 1 death-inducer obliterator 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03015 mRNA surveillance pathway 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909201 107942483 831014 832627 103864683 106372406 106366797 102629288 100808809 100791982 100267937 7458998 7471561 11425857 101249111 102580101 107810211 107817439 4341430 4328690 103649038 100501569 123148131 123143278 123406265 8082942 100836963
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