ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4341430	uncharacterized LOC4341430
osa-r.6	4341430	uncharacterized LOC4341430
osa-m.8	4341430	uncharacterized LOC4341430
osa-e.1	4341430	uncharacterized LOC4341430
osa-u.5	4328690	uncharacterized LOC4328690
zma-u.5	103649038	uncharacterized LOC103649038
zma-u.5	103627127	death-inducer obliterator 1-like
zma-u.5	100501569	putative SPOC domain / Transcription elongation factor S-II protein
ath-u.5	AT2G25640	SPOC domain / Transcription elongation factor S-II protein
ath-u.5	AT5G11430	SPOC domain / Transcription elongation factor S-II protein
ath-u.5	AT5G25520	SPOC domain / Transcription elongation factor S-II protein
gma-u.5	100808809	death-inducer obliterator 1
gma-u.5	100791982	uncharacterized LOC100791982
sly-u.5	101249111	uncharacterized LOC101249111
vvi-u.5	100267937	uncharacterized LOC100267937
ppo-u.5	7458998	uncharacterized LOC7458998
ppo-u.5	7471561	uncharacterized LOC7471561
mtr-u.5	11425857	uncharacterized LOC11425857

Annotation

functional annotation

KEGG

GO BP

GO:0006351 [list] [network] DNA-templated transcription

(227 genes)

IEA

GO CC

GO MF

Protein

XP_015641110.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 5

(predict for XP_015641110.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_015641110.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4341430	osa-r.6 for 4341430	osa-m.8 for 4341430	osa-e.1 for 4341430	osa-u.5 for 4328690	zma-u.5 for 103649038	zma-u.5 for 103627127	zma-u.5 for 100501569	ath-u.5 for AT2G25640	ath-u.5 for AT5G11430	ath-u.5 for AT5G25520	gma-u.5 for 100808809	gma-u.5 for 100791982	sly-u.5 for 101249111	vvi-u.5 for 100267937	ppo-u.5 for 7458998	ppo-u.5 for 7471561	mtr-u.5 for 11425857

Ortholog

Ortholog ID: 4873

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC4341430

uncharacterized LOC4328690

uncharacterized LOC123148131

death-inducer obliterator 1

uncharacterized LOC103649038

putative SPOC domain / Transcription elongation factor S-II protein

death-inducer obliterator 1

SPOC domain / Transcription elongation factor S-II protein

death-inducer obliterator 1

uncharacterized LOC100791982

uncharacterized LOC101249111

uncharacterized LOC103864683

uncharacterized LOC100267937

uncharacterized LOC7458998

uncharacterized LOC7471561

uncharacterized LOC11425857

uncharacterized LOC107909201

uncharacterized LOC107942483

uncharacterized LOC106372406

uncharacterized LOC106366797

death-inducer obliterator 1-like

hypothetical protein

uncharacterized LOC107810211

uncharacterized LOC107817439

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2
ath03015	mRNA surveillance pathway	2
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	3
gma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

4341430

4328690

123148131

123143278

123406265

100836963

103649038

100501569

8082942

831014

832627

100808809

100791982

101249111

103864683

100267937

7458998

7471561

11425857

107909201

107942483

106372406

106366797

102580101

102629288

107810211

107817439

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4341430 (osa-u.5 coexpression data)

Top 50 enrichment test to 4341430 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4341430 (osa-u.5 coexpression data)

Top 50 enrichment test to 4341430 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**