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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909391   SCARECROW-LIKE protein 7 
 ghi-r.1   107945747   SCARECROW-LIKE protein 7 
 ghi-r.1   121209706   SCARECROW-LIKE protein 7 
 ghi-r.1   107926750   SCARECROW-LIKE protein 7 
 ath-u.5   AT3G50650   GRAS family transcription factor 
 ath-u.5   AT5G66770   GRAS family transcription factor 
 bra-r.6   103829567   scarecrow-like protein 4 
 bna-r.1   106358342   scarecrow-like protein 4 
 bna-r.1   106390362   scarecrow-like protein 4 
 cit-r.1   102624250   SCARECROW-LIKE protein 7 
 gma-u.5   100800989   scarecrow-like protein 4 
 gma-u.5   100792494   SCARECROW-LIKE protein 7 
 vvi-u.5   100246179   SCARECROW-LIKE protein 7 
 ppo-u.5   18099283   SCARECROW-LIKE protein 7 
 ppo-u.5   7473171   SCARECROW-LIKE protein 7 
 mtr-u.5   11446666   SCARECROW-LIKE protein 7 
 sly-u.5   101257128   SCARECROW-LIKE protein 7 
 sot-r.1   102604465   scarecrow-like protein 4 
 nta-r.1   107777279   SCARECROW-LIKE protein 7-like 
 nta-r.1   107775207   SCARECROW-LIKE protein 7 
 osa-u.5   4333948   SCARECROW-LIKE protein 7-like 
 zma-u.5   103643942   SCARECROW-LIKE protein 7 
 zma-u.5   103625927   SCARECROW-LIKE protein 7 
 tae-r.2   123095941   SCARECROW-LIKE protein 7-like 
 tae-r.2   123090910   SCARECROW-LIKE protein 7 
 tae-r.2   123087050   SCARECROW-LIKE protein 7 
 hvu-r.1   123447599   SCARECROW-LIKE protein 7 
 sbi-r.1   8063355   scarecrow-like protein 4 
 bdi-r.1   100831491   SCARECROW-LIKE protein 7 

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Top 50 coexpressed genes to 107909391 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909391 (ghi-r.1 coexpression data)

CoexMap"107909391"


ghiLOC107909391 | Entrez gene ID : 107909391    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016692369.2 [sequence] [blastp]
XP_016692370.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_016692369.2)
cyto 6,  nucl 4  (predict for XP_016692370.2)
Subcellular
localization
TargetP
other 5  (predict for XP_016692369.2)
other 5  (predict for XP_016692370.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909391
ghi-r.1
for
107945747
ghi-r.1
for
121209706
ghi-r.1
for
107926750
ath-u.5
for
AT3G50650
ath-u.5
for
AT5G66770
bra-r.6
for
103829567
bna-r.1
for
106358342
bna-r.1
for
106390362
cit-r.1
for
102624250
gma-u.5
for
100800989
gma-u.5
for
100792494
vvi-u.5
for
100246179
ppo-u.5
for
18099283
ppo-u.5
for
7473171
mtr-u.5
for
11446666
sly-u.5
for
101257128
sot-r.1
for
102604465
nta-r.1
for
107777279
nta-r.1
for
107775207
osa-u.5
for
4333948
zma-u.5
for
103643942
zma-u.5
for
103625927
tae-r.2
for
123095941
tae-r.2
for
123090910
tae-r.2
for
123087050
hvu-r.1
for
123447599
sbi-r.1
for
8063355
bdi-r.1
for
100831491


Ortholog ID: 8044
Species ghi ghi ghi ath ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107909391 LOC107945747 LOC121209706 AT3G50650 AT5G66770 LOC103829567 LOC106358342 LOC106390362 LOC102624250 LOC100800989 LOC100792494 LOC100246179 LOC18099283 LOC7473171 LOC11446666 LOC101257128 LOC102604465 LOC107777279 LOC107775207 LOC4333948 LOC103643942 LOC103625927 LOC123095941 LOC123090910 LOC123087050 LOC123447599 LOC8063355 LOC100831491
Function* SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 GRAS family transcription factor GRAS family transcription factor scarecrow-like protein 4 scarecrow-like protein 4 scarecrow-like protein 4 SCARECROW-LIKE protein 7 scarecrow-like protein 4 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 scarecrow-like protein 4 SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 scarecrow-like protein 4 SCARECROW-LIKE protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00330 Arginine and proline metabolism 3
ppo00053 Ascorbate and aldarate metabolism 2
ppo00071 Fatty acid degradation 2
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00010 Glycolysis / Gluconeogenesis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00380 Tryptophan metabolism 2
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909391 107945747 121209706 824228 836810 103829567 106358342 106390362 102624250 100800989 100792494 100246179 18099283 7473171 11446666 101257128 102604465 107777279 107775207 4333948 103643942 103625927 123095941 123090910 123087050 123447599 8063355 100831491
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