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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909632   U-box domain-containing protein 18 
 ghi-r.1   107886666   U-box domain-containing protein 19 
 ghi-r.1   121211267   U-box domain-containing protein 19 
 ghi-r.1   121224460   U-box domain-containing protein 19 
 ath-u.5   PUB18   plant U-box 18 
 ath-u.5   PUB19   ARM repeat superfamily protein 
 bra-r.6   103829733   U-box domain-containing protein 19 
 bra-r.6   103871832   U-box domain-containing protein 18 
 bna-r.1   111202341   U-box domain-containing protein 19-like 
 bna-r.1   106450052   U-box domain-containing protein 19 
 bna-r.1   106393029   U-box domain-containing protein 19-like 
 cit-r.1   102608641   U-box domain-containing protein 18 
 cit-r.1   102613373   U-box domain-containing protein 19-like 
 gma-u.5   100787869   U-box domain-containing protein 19 
 gma-u.5   100795816   U-box domain-containing protein 19 
 vvi-u.5   100243339   U-box domain-containing protein 19 
 vvi-u.5   100241707   U-box domain-containing protein 19-like 
 ppo-u.5   7457723   U-box domain-containing protein 19 
 ppo-u.5   7458028   U-box domain-containing protein 19 
 mtr-u.5   25489542   U-box domain-containing protein 18 
 mtr-u.5   11446555   U-box domain-containing protein 19 
 mtr-u.5   11406349   U-box domain-containing protein 19 
 sly-u.5   101249360   U-box domain-containing protein 19 
 sly-u.5   101249811   U-box domain-containing protein 19-like 
 sot-r.1   107059435   U-box domain-containing protein 18-like 
 sot-r.1   102591646   U-box domain-containing protein 19-like 
 sot-r.1   102595789   U-box domain-containing protein 18-like 
 nta-r.1   107783945   U-box domain-containing protein 19 
 nta-r.1   107788924   U-box domain-containing protein 18-like 
 nta-r.1   107797237   U-box domain-containing protein 19 
 osa-u.5   4345574   U-box domain-containing protein 19 
 osa-u.5   4346922   U-box domain-containing protein 19 
 zma-u.5   100281562   ubiquitin-protein ligase 
 zma-u.5   103653432   U-box domain-containing protein 18 
 tae-r.2   123103637   U-box domain-containing protein 19-like 
 tae-r.2   123046829   U-box domain-containing protein 19-like 
 hvu-r.1   123395831   U-box domain-containing protein 19-like 
 hvu-r.1   123430895   U-box domain-containing protein 19-like 
 sbi-r.1   8056192   U-box domain-containing protein 19 
 bdi-r.1   100835758   U-box domain-containing protein 19 

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Top 50 coexpressed genes to 107909632 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909632 (ghi-r.1 coexpression data)

CoexMap"107909632"


ghiLOC107909632 | Entrez gene ID : 107909632    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 2 2 2 3 2 3 3 2 2 2 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016692732.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_016692732.1)
Subcellular
localization
TargetP
other 3  (predict for XP_016692732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909632
ghi-r.1
for
107886666
ghi-r.1
for
121211267
ghi-r.1
for
121224460
ath-u.5
for
PUB18
ath-u.5
for
PUB19
bra-r.6
for
103829733
bra-r.6
for
103871832
bna-r.1
for
111202341
bna-r.1
for
106450052
bna-r.1
for
106393029
cit-r.1
for
102608641
cit-r.1
for
102613373
gma-u.5
for
100787869
gma-u.5
for
100795816
vvi-u.5
for
100243339
vvi-u.5
for
100241707
ppo-u.5
for
7457723
ppo-u.5
for
7458028
mtr-u.5
for
25489542
mtr-u.5
for
11446555
mtr-u.5
for
11406349
sly-u.5
for
101249360
sly-u.5
for
101249811
sot-r.1
for
107059435
sot-r.1
for
102591646
sot-r.1
for
102595789
nta-r.1
for
107783945
nta-r.1
for
107788924
nta-r.1
for
107797237
osa-u.5
for
4345574
osa-u.5
for
4346922
zma-u.5
for
100281562
zma-u.5
for
103653432
tae-r.2
for
123103637
tae-r.2
for
123046829
hvu-r.1
for
123395831
hvu-r.1
for
123430895
sbi-r.1
for
8056192
bdi-r.1
for
100835758


Ortholog ID: 3161
Species ghi ghi ghi ath ath bra bra bna bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC107909632 LOC107886666 LOC121224460 PUB18 PUB19 LOC103829733 LOC103871832 LOC111202341 LOC106350340 LOC125601289 LOC102608641 LOC102613373 LOC100787869 LOC100795816 LOC100243339 LOC100241707 LOC7457723 LOC7458028 LOC25489542 LOC11446555 LOC11406349 LOC101249360 LOC101249811 LOC102591646 LOC102595789 LOC107062219 LOC107783945 LOC107788924 LOC107797237 LOC4345574 LOC4346922 LOC100281562 LOC103653432 LOC123116128 LOC123121415 LOC123395831 LOC123430895 LOC8056192 LOC100835758
Function* U-box domain-containing protein 18 U-box domain-containing protein 19 U-box domain-containing protein 19 plant U-box 18 ARM repeat superfamily protein U-box domain-containing protein 19 U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 18 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19-like U-box domain-containing protein 18-like U-box domain-containing protein 18-like U-box domain-containing protein 19 U-box domain-containing protein 18-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 ubiquitin-protein ligase U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 6
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 5
bra04075 Plant hormone signal transduction 5
bra00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 5
bra04075 Plant hormone signal transduction 5
bra00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 5
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 8
sly04016 MAPK signaling pathway - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 6
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 6
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 5
zma04075 Plant hormone signal transduction 5
zma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 4
tae04075 Plant hormone signal transduction 4
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
sbi00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909632 107886666 121224460 837597 842314 103829733 103871832 111202341 106350340 125601289 102608641 102613373 100787869 100795816 100243339 100241707 7457723 7458028 25489542 11446555 11406349 101249360 101249811 102591646 102595789 107062219 107783945 107788924 107797237 4345574 4346922 100281562 103653432 123116128 123121415 123395831 123430895 8056192 100835758
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