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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909681   probable polygalacturonase At1g80170 
 ath-u.5   AT1G23460   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G70500   Pectin lyase-like superfamily protein 
 gma-u.5   100804067   probable polygalacturonase At1g80170 
 gma-u.5   100806068   probable polygalacturonase At1g80170 
 vvi-u.5   100263605   probable polygalacturonase At1g80170 
 ppo-u.5   7480405   probable polygalacturonase At1g80170 
 ppo-u.5   18101886   probable polygalacturonase At1g80170 
 mtr-u.5   25501371   probable polygalacturonase At1g80170 
 sly-u.5   101257654   probable polygalacturonase At1g80170 
 sly-u.5   101248050   probable polygalacturonase At1g80170 
 osa-u.5   4328189   probable polygalacturonase At1g80170 

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Top 50 coexpressed genes to 107909681 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909681 (ghi-r.1 coexpression data)

CoexMap"107909681"


ghiLOC107909681 | Entrez gene ID : 107909681    
Species ghi ath gma vvi ppo mtr sly osa bdi hvu bra cit bna sbi sot nta cre tae zma
Paralog 1 2 2 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1780 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (164 genes)  IEA  
Protein XP_016692789.2 [sequence] [blastp]
XP_040944862.1 [sequence] [blastp]
XP_040944864.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 2,  cyto_pero 2,  plas 1  (predict for XP_016692789.2)
cyto 5,  plas 1,  extr 1,  nucl 1,  mito 1,  E.R. 1,  golg_plas 1,  cysk_plas 1  (predict for XP_040944862.1)
cyto 5,  E.R. 1,  nucl 1,  mito 1,  plas 1,  cysk 1,  golg 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1  (predict for XP_040944864.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016692789.2)
scret 9  (predict for XP_040944862.1)
scret 9  (predict for XP_040944864.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909681
ath-u.5
for
AT1G23460
ath-u.5
for
AT1G70500
gma-u.5
for
100804067
gma-u.5
for
100806068
vvi-u.5
for
100263605
ppo-u.5
for
7480405
ppo-u.5
for
18101886
mtr-u.5
for
25501371
sly-u.5
for
101257654
sly-u.5
for
101248050
osa-u.5
for
4328189


Ortholog ID: 4822
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa tae tae hvu bdi
Symbol LOC107909681 LOC107918238 AT1G23460 AT1G70500 LOC103835664 LOC103829271 LOC111199832 LOC111199834 LOC102623269 LOC100806068 LOC100804067 LOC100263605 LOC7480405 LOC7489119 LOC25501371 LOC101248050 LOC101257654 LOC102578221 LOC102579939 LOC142168648 LOC107789394 LOC4328189 LOC123136060 LOC123131980 LOC123404704 LOC100832774
Function* probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 putative polygalacturonase At1g80170 putative polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
hvu04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909681 107918238 838954 843386 103835664 103829271 111199832 111199834 102623269 100806068 100804067 100263605 7480405 7489119 25501371 101248050 101257654 102578221 102579939 142168648 107789394 4328189 123136060 123131980 123404704 100832774
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