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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911602   uncharacterized LOC107911602 
 ath-u.5   MEE44   Nucleotidyltransferase family protein 
 bra-r.6   103858376   uncharacterized LOC103858376 
 bna-r.1   106438382   uncharacterized LOC106438382 
 bna-r.1   106438861   uncharacterized LOC106438861 
 cit-r.1   102608196   uncharacterized LOC102608196 
 vvi-u.5   100265029   uncharacterized LOC100265029 
 ppo-u.5   7488883   uncharacterized LOC7488883 
 mtr-u.5   25491692   uncharacterized LOC25491692 
 sly-u.5   101252827   uncharacterized LOC101252827 
 sot-r.1   102580618   uncharacterized LOC102580618 
 nta-r.1   107762184   uncharacterized LOC107762184 
 nta-r.1   107791440   uncharacterized LOC107791440 
 osa-u.5   9268159   uncharacterized LOC9268159 
 zma-u.5   100278145   uncharacterized LOC100278145 
 tae-r.2   123161845   uncharacterized LOC123161845 
 tae-r.2   123164750   uncharacterized LOC123164750 
 tae-r.2   123149150   uncharacterized LOC123149150 
 hvu-r.1   123412906   uncharacterized LOC123412906 
 sbi-r.1   8083186   uncharacterized LOC8083186 
 bdi-r.1   100844132   uncharacterized LOC100844132 

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Top 50 coexpressed genes to 107911602 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911602 (ghi-r.1 coexpression data)

CoexMap"107911602"


ghiLOC107911602 | Entrez gene ID : 107911602    
Species ghi ath bra bna cit vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi gma cre
Paralog 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031123 [list] [network] RNA 3'-end processing  (113 genes)  IEA  
GO CC
GO:0031499 [list] [network] TRAMP complex  (6 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO MF
GO:1990817 [list] [network] poly(A) RNA polymerase activity  (17 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016694950.1 [sequence] [blastp]
XP_040961723.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  pero 2  (predict for XP_016694950.1)
chlo 4,  nucl 4,  pero 2,  chlo_mito 2  (predict for XP_040961723.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016694950.1)
chlo 8  (predict for XP_040961723.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911602
ath-u.5
for
MEE44
bra-r.6
for
103858376
bna-r.1
for
106438382
bna-r.1
for
106438861
cit-r.1
for
102608196
vvi-u.5
for
100265029
ppo-u.5
for
7488883
mtr-u.5
for
25491692
sly-u.5
for
101252827
sot-r.1
for
102580618
nta-r.1
for
107762184
nta-r.1
for
107791440
osa-u.5
for
9268159
zma-u.5
for
100278145
tae-r.2
for
123161845
tae-r.2
for
123164750
tae-r.2
for
123149150
hvu-r.1
for
123412906
sbi-r.1
for
8083186
bdi-r.1
for
100844132


Ortholog ID: 11715
Species ghi ath bra bna bna cit vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107911602 MEE44 LOC103858376 LOC106438382 LOC106438861 LOC102608196 LOC100265029 LOC7488883 LOC25491692 LOC101252827 LOC102580618 LOC107762184 LOC107791440 LOC9268159 LOC100278145 LOC123161845 LOC123164750 LOC123149150 LOC123412906 LOC8083186 LOC100844132
Function* uncharacterized LOC107911602 Nucleotidyltransferase family protein uncharacterized LOC103858376 uncharacterized LOC106438382 uncharacterized LOC106438861 uncharacterized LOC102608196 uncharacterized LOC100265029 uncharacterized LOC7488883 uncharacterized LOC25491692 uncharacterized LOC101252827 uncharacterized LOC102580618 uncharacterized LOC107762184 uncharacterized LOC107791440 uncharacterized LOC9268159 uncharacterized LOC100278145 uncharacterized LOC123161845 uncharacterized LOC123164750 uncharacterized LOC123149150 uncharacterized LOC123412906 uncharacterized LOC8083186 uncharacterized LOC100844132
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
nta04141 Protein processing in endoplasmic reticulum 2
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00310 Lysine degradation 3
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911602 828214 103858376 106438382 106438861 102608196 100265029 7488883 25491692 101252827 102580618 107762184 107791440 9268159 100278145 123161845 123164750 123149150 123412906 8083186 100844132
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