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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911775   pentatricopeptide repeat-containing protein At5g40400 
 ghi-r.1   107923540   pentatricopeptide repeat-containing protein At5g40400 
 ath-u.5   AT5G40400   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103863988   pentatricopeptide repeat-containing protein At5g40400 
 bna-r.1   106446162   pentatricopeptide repeat-containing protein At5g40400-like 
 bna-r.1   106391033   pentatricopeptide repeat-containing protein At5g40400-like 
 cit-r.1   127898566   pentatricopeptide repeat-containing protein At5g40400 
 gma-u.5   100776934   pentatricopeptide repeat-containing protein At5g40400 
 vvi-u.5   100852903   pentatricopeptide repeat-containing protein At5g40400 
 ppo-u.5   7461319   pentatricopeptide repeat-containing protein At5g40400 
 mtr-u.5   11430173   pentatricopeptide repeat-containing protein At5g40400 
 sly-u.5   101256354   pentatricopeptide repeat-containing protein At5g40400 
 sot-r.1   102587608   pentatricopeptide repeat-containing protein At5g40400 
 nta-r.1   107766479   uncharacterized LOC107766479 
 nta-r.1   107800324   uncharacterized LOC107800324 

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Top 50 coexpressed genes to 107911775 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911775 (ghi-r.1 coexpression data)

CoexMap"107911775"


ghiLOC107911775 | Entrez gene ID : 107911775    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma cre sbi tae osa hvu bdi
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016695187.2 [sequence] [blastp]
XP_016695188.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_016695187.2)
chlo 9,  mito 1,  extr 1  (predict for XP_016695188.2)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016695187.2)
chlo 6  (predict for XP_016695188.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911775
ghi-r.1
for
107923540
ath-u.5
for
AT5G40400
bra-r.6
for
103863988
bna-r.1
for
106446162
bna-r.1
for
106391033
cit-r.1
for
127898566
gma-u.5
for
100776934
vvi-u.5
for
100852903
ppo-u.5
for
7461319
mtr-u.5
for
11430173
sly-u.5
for
101256354
sot-r.1
for
102587608
nta-r.1
for
107766479
nta-r.1
for
107800324


Ortholog ID: 13461
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta
Symbol LOC107911775 LOC107923540 AT5G40400 LOC103863988 LOC106446162 LOC106391033 LOC127898566 LOC100776934 LOC100852903 LOC7461319 LOC11430173 LOC101256354 LOC102587608 LOC107766479 LOC107800324
Function* pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400-like pentatricopeptide repeat-containing protein At5g40400-like pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 uncharacterized LOC107766479 uncharacterized LOC107800324
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911775 107923540 834038 103863988 106446162 106391033 127898566 100776934 100852903 7461319 11430173 101256354 102587608 107766479 107800324
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