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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912807   transformation/transcription domain-associated protein 
 ghi-r.1   107936541   transformation/transcription domain-associated protein 
 ghi-r.1   107912994   transformation/transcription domain-associated protein 
 ghi-r.1   107909450   transformation/transcription domain-associated protein 
 ath-u.5   AT2G17930   Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein 
 ath-u.5   AT4G36080   phosphotransferases/inositol or phosphatidylinositol kinase 
 bra-r.6   103837832   transformation/transcription domain-associated protein 
 bra-r.6   103871184   transformation/transcription domain-associated protein 
 bra-r.6   103874096   transformation/transcription domain-associated protein 
 bna-r.1   106354240   transformation/transcription domain-associated protein 
 bna-r.1   106350519   transformation/transcription domain-associated protein-like 
 bna-r.1   106353942   transformation/transcription domain-associated protein 
 cit-r.1   102618003   uncharacterized LOC102618003 
 gma-u.5   100800422   transformation/transcription domain-associated protein 
 gma-u.5   100819389   transformation/transcription domain-associated protein 
 vvi-u.5   100255847   transcription-associated protein 1 
 ppo-u.5   18101081   uncharacterized LOC18101081 
 ppo-u.5   7486566   uncharacterized LOC7486566 
 mtr-u.5   11434915   transformation/transcription domain-associated protein 
 sly-u.5   101258912   uncharacterized LOC101258912 
 sot-r.1   102588838   transformation/transcription domain-associated protein 
 nta-r.1   107801589   uncharacterized LOC107801589 
 nta-r.1   107805619   uncharacterized LOC107805619 
 osa-u.5   9270052   uncharacterized LOC9270052 
 zma-u.5   100382790   transformation/transcription domain-associated protein 
 tae-r.2   123187740   transcription-associated protein 1 
 tae-r.2   123051855   transcription-associated protein 1 
 tae-r.2   123043982   transcription-associated protein 1 
 hvu-r.1   123425027   transformation/transcription domain-associated protein-like 
 sbi-r.1   8072210   transcription-associated protein 1 
 bdi-r.1   100839256   transcription-associated protein 1 
 cre-r.1   CHLRE_02g088750v5   uncharacterized protein 

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Top 50 coexpressed genes to 107912807 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912807 (ghi-r.1 coexpression data)

CoexMap"107912807"


ghiLOC107912807 | Entrez gene ID : 107912807    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03082 [list] [network] ATP-dependent chromatin remodeling (185 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (557 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0035267 [list] [network] NuA4 histone acetyltransferase complex  (44 genes)  IEA  
GO:0000124 [list] [network] SAGA complex  (57 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040962395.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  plas 1,  cysk_nucl 1  (predict for XP_040962395.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040962395.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912807
ghi-r.1
for
107936541
ghi-r.1
for
107912994
ghi-r.1
for
107909450
ath-u.5
for
AT2G17930
ath-u.5
for
AT4G36080
bra-r.6
for
103837832
bra-r.6
for
103871184
bra-r.6
for
103874096
bna-r.1
for
106354240
bna-r.1
for
106350519
bna-r.1
for
106353942
cit-r.1
for
102618003
gma-u.5
for
100800422
gma-u.5
for
100819389
vvi-u.5
for
100255847
ppo-u.5
for
18101081
ppo-u.5
for
7486566
mtr-u.5
for
11434915
sly-u.5
for
101258912
sot-r.1
for
102588838
nta-r.1
for
107801589
nta-r.1
for
107805619
osa-u.5
for
9270052
zma-u.5
for
100382790
tae-r.2
for
123187740
tae-r.2
for
123051855
tae-r.2
for
123043982
hvu-r.1
for
123425027
sbi-r.1
for
8072210
bdi-r.1
for
100839256
cre-r.1
for
CHLRE_02g088750v5


Ortholog ID: 6218
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107936541 LOC107912994 LOC107909450 AT2G17930 AT4G36080 LOC103837832 LOC103871184 LOC103874096 LOC106354240 LOC106353942 LOC106400090 LOC102618003 LOC100800422 LOC100819389 LOC100255847 LOC18101081 LOC7486566 LOC11434915 LOC101258912 LOC102588838 LOC107801589 LOC107805619 LOC9270052 LOC100382790 LOC123187740 LOC123051855 LOC123043982 LOC123425027 LOC8072210 LOC100839256 CHLRE_02g088750v5
Function* transformation/transcription domain-associated protein transformation/transcription domain-associated protein transformation/transcription domain-associated protein Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein phosphotransferases/inositol or phosphatidylinositol kinase transformation/transcription domain-associated protein transformation/transcription domain-associated protein transformation/transcription domain-associated protein transformation/transcription domain-associated protein transformation/transcription domain-associated protein transformation/transcription domain-associated protein uncharacterized LOC102618003 transformation/transcription domain-associated protein transformation/transcription domain-associated protein transcription-associated protein 1 uncharacterized LOC18101081 uncharacterized LOC7486566 transformation/transcription domain-associated protein uncharacterized LOC101258912 transformation/transcription domain-associated protein uncharacterized LOC107801589 uncharacterized LOC107805619 uncharacterized LOC9270052 transformation/transcription domain-associated protein transcription-associated protein 1 transcription-associated protein 1 transcription-associated protein 1 transformation/transcription domain-associated protein-like transcription-associated protein 1 transcription-associated protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03040 Spliceosome 3
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03040 Spliceosome 3
ghi03018 RNA degradation 3
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 3
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna04120 Ubiquitin mediated proteolysis 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna04120 Ubiquitin mediated proteolysis 4
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936541 107912994 107909450 816303 829764 103837832 103871184 103874096 106354240 106353942 106400090 102618003 100800422 100819389 100255847 18101081 7486566 11434915 101258912 102588838 107801589 107805619 9270052 100382790 123187740 123051855 123043982 123425027 8072210 100839256 5727442
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