Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913712   carbamoyl-phosphate synthase small chain, chloroplastic 
 ghi-r.1   107911660   carbamoyl-phosphate synthase small chain, chloroplastic 
 ghi-r.1   107899531   carbamoyl-phosphate synthase small chain, chloroplastic 
 ghi-r.1   107890357   carbamoyl-phosphate synthase small chain, chloroplastic 
 ath-u.5   CARA   carbamoyl phosphate synthetase A 
 bra-r.6   103831356   carbamoyl-phosphate synthase small chain, chloroplastic 
 bna-r.1   106435229   carbamoyl-phosphate synthase small chain, chloroplastic 
 bna-r.1   106406783   carbamoyl-phosphate synthase small chain, chloroplastic 
 bna-r.1   106394047   carbamoyl-phosphate synthase small chain, chloroplastic 
 cit-r.1   102620935   carbamoyl-phosphate synthase small chain, chloroplastic 
 gma-u.5   100806168   carbamoyl-phosphate synthase small chain, chloroplastic 
 gma-u.5   100788470   carbamoyl-phosphate synthase small chain-like 
 gma-u.5   100776931   carbamoyl-phosphate synthase small chain, chloroplastic 
 vvi-u.5   100255702   anthranilate synthase 02 
 ppo-u.5   18094578   carbamoyl-phosphate synthase small chain, chloroplastic 
 ppo-u.5   7461992   carbamoyl-phosphate synthase small chain, chloroplastic 
 mtr-u.5   11424976   carbamoyl-phosphate synthase small chain, chloroplastic 
 mtr-u.5   11407155   carbamoyl-phosphate synthase small chain, chloroplastic 
 sly-u.5   101258052   carbamoyl phosphate synthase small chain, chloroplastic 
 sot-r.1   102589678   carbamoyl-phosphate synthase small chain, chloroplastic-like 
 sot-r.1   102604705   carbamoyl-phosphate synthase small chain, chloroplastic-like 
 nta-r.1   107778194   carbamoyl phosphate synthase small chain, chloroplastic 
 nta-r.1   107793380   carbamoyl-phosphate synthase small chain, chloroplastic-like 
 osa-u.5   4330474   carbamoyl-phosphate synthase small chain, chloroplastic-like 
 zma-u.5   100273931   carbamoyl-phosphate synthase small chain 
 zma-u.5   100193467   uncharacterized LOC100193467 
 tae-r.2   123111435   carbamoyl-phosphate synthase small chain, chloroplastic 
 tae-r.2   123103246   carbamoyl-phosphate synthase small chain, chloroplastic 
 tae-r.2   123120553   carbamoyl-phosphate synthase small chain, chloroplastic 
 hvu-r.1   123394976   carbamoyl-phosphate synthase small chain, chloroplastic 
 sbi-r.1   8073153   carbamoyl-phosphate synthase small chain, chloroplastic 
 bdi-r.1   100834202   carbamoyl-phosphate synthase small chain, chloroplastic 
 cre-r.1   CHLRE_06g308500v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107913712 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107913712 (ghi-r.1 coexpression data)

CoexMap"107913712"


ghiLOC107913712 | Entrez gene ID : 107913712    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 1 3 1 2 2 1 2 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00220 [list] [network] Arginine biosynthesis (92 genes)
ghi00240 [list] [network] Pyrimidine metabolism (157 genes)
ghi00250 [list] [network] Alanine, aspartate and glutamate metabolism (131 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (20 genes)  IEA  
GO:0006526 [list] [network] L-arginine biosynthetic process  (23 genes)  IEA  
GO:0006541 [list] [network] glutamine metabolic process  (29 genes)  IEA  
GO CC
GO:0005951 [list] [network] carbamoyl-phosphate synthase complex  (4 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0004088 [list] [network] carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity  (6 genes)  IEA  
Protein XP_016697873.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016697873.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016697873.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913712
ghi-r.1
for
107911660
ghi-r.1
for
107899531
ghi-r.1
for
107890357
ath-u.5
for
CARA
bra-r.6
for
103831356
bna-r.1
for
106435229
bna-r.1
for
106406783
bna-r.1
for
106394047
cit-r.1
for
102620935
gma-u.5
for
100806168
gma-u.5
for
100788470
gma-u.5
for
100776931
vvi-u.5
for
100255702
ppo-u.5
for
18094578
ppo-u.5
for
7461992
mtr-u.5
for
11424976
mtr-u.5
for
11407155
sly-u.5
for
101258052
sot-r.1
for
102589678
sot-r.1
for
102604705
nta-r.1
for
107778194
nta-r.1
for
107793380
osa-u.5
for
4330474
zma-u.5
for
100273931
zma-u.5
for
100193467
tae-r.2
for
123111435
tae-r.2
for
123103246
tae-r.2
for
123120553
hvu-r.1
for
123394976
sbi-r.1
for
8073153
bdi-r.1
for
100834202
cre-r.1
for
CHLRE_06g308500v5


Ortholog ID: 6008
Species ghi ghi ghi ath bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107911660 LOC107899531 LOC107890357 CARA LOC103831356 LOC106435229 LOC106406783 LOC106354079 LOC102620935 LOC100806168 LOC100788470 LOC100776931 LOC100255702 LOC18094578 LOC7461992 LOC11424976 LOC11407155 LOC101258052 LOC102589678 LOC102604705 LOC107778194 LOC107793380 LOC4330474 LOC100273931 LOC100193467 LOC123111435 LOC123103246 LOC123120553 LOC123394976 LOC8073153 LOC100834202 CHLRE_06g308500v5
Function* carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl phosphate synthetase A carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic-like carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain-like carbamoyl-phosphate synthase small chain, chloroplastic anthranilate synthase 02 carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic-like carbamoyl-phosphate synthase small chain, chloroplastic-like carbamoyl phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic-like carbamoyl-phosphate synthase small chain, chloroplastic-like carbamoyl-phosphate synthase small chain uncharacterized LOC100193467 carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic carbamoyl-phosphate synthase small chain, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath01240 Biosynthesis of cofactors 5
ath03010 Ribosome 4
ath00300 Lysine biosynthesis 4
ath00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra00230 Purine metabolism 4
bra03010 Ribosome 4
bra01240 Biosynthesis of cofactors 3
bra00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00240 Pyrimidine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00240 Pyrimidine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00240 Pyrimidine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01240 Biosynthesis of cofactors 3
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00290 Valine, leucine and isoleucine biosynthesis 3
gma00650 Butanoate metabolism 3
gma00660 C5-Branched dibasic acid metabolism 3
gma00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma00220 Arginine biosynthesis 2
gma00240 Pyrimidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00620 Pyruvate metabolism 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03040 Spliceosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
ppo03040 Spliceosome 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00270 Cysteine and methionine metabolism 2
mtr00290 Valine, leucine and isoleucine biosynthesis 2
mtr00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly00970 Aminoacyl-tRNA biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot01230 Biosynthesis of amino acids 3
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot01240 Biosynthesis of cofactors 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00250 Alanine, aspartate and glutamate metabolism 5
nta01240 Biosynthesis of cofactors 5
nta03040 Spliceosome 4
nta03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 5
nta01240 Biosynthesis of cofactors 5
nta00230 Purine metabolism 3
nta01232 Nucleotide metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 7
osa00300 Lysine biosynthesis 5
osa00230 Purine metabolism 4
osa01240 Biosynthesis of cofactors 3
osa00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma00220 Arginine biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 10
zma00340 Histidine metabolism 4
zma00220 Arginine biosynthesis 3
zma00250 Alanine, aspartate and glutamate metabolism 3
zma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 6
tae00240 Pyrimidine metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 6
tae01240 Biosynthesis of cofactors 6
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 8
tae01240 Biosynthesis of cofactors 8
tae00220 Arginine biosynthesis 6
tae00250 Alanine, aspartate and glutamate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 6
tae00240 Pyrimidine metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 6
tae01240 Biosynthesis of cofactors 6
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00030 Pentose phosphate pathway 2
hvu01200 Carbon metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi00300 Lysine biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
sbi01240 Biosynthesis of cofactors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi03013 Nucleocytoplasmic transport 2
bdi00240 Pyrimidine metabolism 2
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 9
cre01230 Biosynthesis of amino acids 7
cre00250 Alanine, aspartate and glutamate metabolism 5
cre01210 2-Oxocarboxylic acid metabolism 4
cre00230 Purine metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911660 107899531 107890357 822396 103831356 106435229 106406783 106354079 102620935 100806168 100788470 100776931 100255702 18094578 7461992 11424976 11407155 101258052 102589678 102604705 107778194 107793380 4330474 100273931 100193467 123111435 123103246 123120553 123394976 8073153 100834202 5716840
The preparation time of this page was 0.2 [sec].