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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914201   auxin response factor 1-like 
 ath-u.5   ARF1   auxin response factor 1 
 gma-u.5   100819023   auxin response factor 1 
 gma-u.5   100815450   auxin response factor 1 
 gma-u.5   100793224   auxin response factor 1 
 vvi-u.5   100263592   auxin response factor 1 
 vvi-u.5   100264303   auxin response factor 1 
 ppo-u.5   18098365   auxin response factor 1 
 ppo-u.5   18096589   auxin response factor 1 
 mtr-u.5   11423560   auxin response factor 1 
 sly-u.5   ARF1   auxin response factor 1 
 osa-u.5   4329672   auxin response factor 7-like 
 osa-u.5   4335934   auxin response factor 9-like 
 zma-u.5   100502393   uncharacterized LOC100502393 
 zma-u.5   100285977   uncharacterized LOC100285977 
 zma-u.5   103646418   auxin response factor 9 

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Top 50 coexpressed genes to 107914201 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914201 (ghi-r.1 coexpression data)

CoexMap"107914201"


ghiLOC107914201 | Entrez gene ID : 107914201    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 3 2 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (1008 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein NP_001386760.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001386760.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001386760.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914201
ath-u.5
for
ARF1
gma-u.5
for
100819023
gma-u.5
for
100815450
gma-u.5
for
100793224
vvi-u.5
for
100263592
vvi-u.5
for
100264303
ppo-u.5
for
18098365
ppo-u.5
for
18096589
mtr-u.5
for
11423560
sly-u.5
for
ARF1
osa-u.5
for
4329672
osa-u.5
for
4335934
zma-u.5
for
100502393
zma-u.5
for
100285977
zma-u.5
for
103646418


Ortholog ID: 6736
Species ghi ghi ath bra bna bna cit cit gma gma vvi vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC107896654 LOC107914201 ARF1 LOC103829217 LOC106376742 LOC106376940 LOC102611261 LOC102618110 LOC100819023 LOC100815450 LOC100264303 LOC100263592 LOC18098365 LOC18096589 LOC11423560 ARF1 LOC102604408 LOC107770412 LOC107818819 LOC4335934 LOC4329672 LOC100285977 LOC100502393 LOC123189292 LOC123053385 LOC123426793 LOC8068888 LOC8080341 LOC100842263 LOC100826105
Function* auxin response factor 1 auxin response factor 1-like auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1-like auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 1 auxin response factor 9-like auxin response factor 7-like uncharacterized LOC100285977 uncharacterized LOC100502393 auxin response factor 9 auxin response factor 9 auxin response factor 9 auxin response factor 7 auxin response factor 9 auxin response factor 7 auxin response factor 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04075 Plant hormone signal transduction 3
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04144 Endocytosis 2
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 10
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107896654 107914201 842268 103829217 106376742 106376940 102611261 102618110 100819023 100815450 100264303 100263592 18098365 18096589 11423560 100736509 102604408 107770412 107818819 4335934 4329672 100285977 100502393 123189292 123053385 123426793 8068888 8080341 100842263 100826105
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