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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914376   E3 ubiquitin-protein ligase RKP 
 ghi-r.1   121208246   E3 ubiquitin-protein ligase RKP 
 ath-u.5   RKP   uncharacterized protein 
 bra-r.6   103842484   E3 ubiquitin-protein ligase RKP 
 bna-r.1   106429081   E3 ubiquitin-protein ligase RKP-like 
 bna-r.1   106415060   E3 ubiquitin-protein ligase RKP 
 cit-r.1   102631448   E3 ubiquitin-protein ligase RKP 
 gma-u.5   100800617   E3 ubiquitin-protein ligase RKP 
 gma-u.5   100792381   E3 ubiquitin-protein ligase RKP 
 vvi-u.5   100250977   E3 ubiquitin-protein ligase RKP 
 ppo-u.5   7457129   E3 ubiquitin-protein ligase RKP 
 ppo-u.5   7486334   E3 ubiquitin-protein ligase RKP 
 mtr-u.5   11443494   E3 ubiquitin-protein ligase RKP 
 sly-u.5   101249347   E3 ubiquitin-protein ligase RKP 
 sot-r.1   102589041   E3 ubiquitin-protein ligase RKP 
 nta-r.1   107761846   E3 ubiquitin-protein ligase RKP 
 nta-r.1   107804418   E3 ubiquitin-protein ligase RKP-like 
 nta-r.1   142174565   E3 ubiquitin-protein ligase RKP-like 
 osa-u.5   4343974   E3 ubiquitin-protein ligase RKP 
 zma-u.5   100280438   uncharacterized LOC100280438 
 sbi-r.1   8079354   E3 ubiquitin-protein ligase RKP 
 cre-r.1   CHLRE_12g519150v5   uncharacterized protein 

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Top 50 coexpressed genes to 107914376 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914376 (ghi-r.1 coexpression data)

CoexMap"107914376"


ghiLOC107914376 | Entrez gene ID : 107914376    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma sbi cre hvu tae bdi
Paralog 2 1 1 2 1 2 1 2 1 1 1 3 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (426 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0034450 [list] [network] ubiquitin-ubiquitin ligase activity  (4 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016698767.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_016698767.2)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_016698767.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914376
ghi-r.1
for
121208246
ath-u.5
for
RKP
bra-r.6
for
103842484
bna-r.1
for
106429081
bna-r.1
for
106415060
cit-r.1
for
102631448
gma-u.5
for
100800617
gma-u.5
for
100792381
vvi-u.5
for
100250977
ppo-u.5
for
7457129
ppo-u.5
for
7486334
mtr-u.5
for
11443494
sly-u.5
for
101249347
sot-r.1
for
102589041
nta-r.1
for
107761846
nta-r.1
for
107804418
nta-r.1
for
142174565
osa-u.5
for
4343974
zma-u.5
for
100280438
sbi-r.1
for
8079354
cre-r.1
for
CHLRE_12g519150v5


Ortholog ID: 11654
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma sbi cre
Symbol LOC107914376 LOC121208246 RKP LOC103842484 LOC106429081 LOC106415060 LOC102631448 LOC100800617 LOC100792381 LOC100250977 LOC7457129 LOC7486334 LOC11443494 LOC101249347 LOC102589041 LOC107761846 LOC107804418 LOC142174565 LOC4343974 LOC100280438 LOC8079354 CHLRE_12g519150v5
Function* E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP uncharacterized protein E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP-like E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP E3 ubiquitin-protein ligase RKP-like E3 ubiquitin-protein ligase RKP-like E3 ubiquitin-protein ligase RKP uncharacterized LOC100280438 E3 ubiquitin-protein ligase RKP uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107914376 121208246 816737 103842484 106429081 106415060 102631448 100800617 100792381 100250977 7457129 7486334 11443494 101249347 102589041 107761846 107804418 142174565 4343974 100280438 8079354 5722615
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