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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916444   putative E3 ubiquitin-protein ligase LIN 
 ghi-r.1   107897477   putative E3 ubiquitin-protein ligase LIN 
 ghi-r.1   107906005   putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1   107958319   putative E3 ubiquitin-protein ligase LIN-1 
 cit-r.1   102619841   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100815587   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100786098   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100784106   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-u.5   100252832   putative E3 ubiquitin-protein ligase LIN 
 ppo-u.5   7457628   putative E3 ubiquitin-protein ligase LIN 
 mtr-u.5   11415917   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101248542   putative E3 ubiquitin-protein ligase LIN 
 sot-r.1   102590538   putative E3 ubiquitin-protein ligase LIN 
 nta-r.1   107796328   putative E3 ubiquitin-protein ligase LIN 
 nta-r.1   107805698   putative E3 ubiquitin-protein ligase LIN 
 osa-u.5   4328428   putative E3 ubiquitin-protein ligase LIN-1 
 zma-u.5   100194083   uncharacterized LOC100194083 
 tae-r.2   123143997   putative E3 ubiquitin-protein ligase LIN-1 
 tae-r.2   123132425   putative E3 ubiquitin-protein ligase LIN-1 
 hvu-r.1   123402983   putative E3 ubiquitin-protein ligase LIN-1 
 sbi-r.1   8077169   putative E3 ubiquitin-protein ligase LIN-1 
 bdi-r.1   100846720   putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 107916444 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916444 (ghi-r.1 coexpression data)

CoexMap"107916444"


ghiLOC107916444 | Entrez gene ID : 107916444    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre ath bna
Paralog 4 1 3 1 1 1 1 1 2 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016701228.2 [sequence] [blastp]
XP_016701230.2 [sequence] [blastp]
XP_040958785.1 [sequence] [blastp]
XP_040958786.1 [sequence] [blastp]
XP_040958787.1 [sequence] [blastp]
XP_040958788.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_016701228.2)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_016701230.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_040958785.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_040958786.1)
nucl 5,  cyto 4,  chlo 1,  vacu 1  (predict for XP_040958787.1)
nucl 5,  cyto 4,  chlo 1,  vacu 1  (predict for XP_040958788.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016701228.2)
other 8  (predict for XP_016701230.2)
other 8  (predict for XP_040958785.1)
other 8  (predict for XP_040958786.1)
other 8  (predict for XP_040958787.1)
other 8  (predict for XP_040958788.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916444
ghi-r.1
for
107897477
ghi-r.1
for
107906005
ghi-r.1
for
107958319
cit-r.1
for
102619841
gma-u.5
for
100815587
gma-u.5
for
100786098
gma-u.5
for
100784106
vvi-u.5
for
100252832
ppo-u.5
for
7457628
mtr-u.5
for
11415917
sly-u.5
for
101248542
sot-r.1
for
102590538
nta-r.1
for
107796328
nta-r.1
for
107805698
osa-u.5
for
4328428
zma-u.5
for
100194083
tae-r.2
for
123143997
tae-r.2
for
123132425
hvu-r.1
for
123402983
sbi-r.1
for
8077169
bdi-r.1
for
100846720


Ortholog ID: 11600
Species ghi ghi ghi cit gma gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107916444 LOC107897477 LOC107958319 LOC102619841 LOC100815587 LOC100786098 LOC100784106 LOC100252832 LOC7457628 LOC11415917 LOC101248542 LOC102590538 LOC107796328 LOC107805698 LOC4328428 LOC100194083 LOC123143997 LOC123132425 LOC123402983 LOC8077169 LOC100846720
Function* putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC100194083 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 5
sbi00270 Cysteine and methionine metabolism 4
sbi00670 One carbon pool by folate 4
sbi00940 Phenylpropanoid biosynthesis 4
sbi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916444 107897477 107958319 102619841 100815587 100786098 100784106 100252832 7457628 11415917 101248542 102590538 107796328 107805698 4328428 100194083 123143997 123132425 123402983 8077169 100846720
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