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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457628   putative E3 ubiquitin-protein ligase LIN 
 ppo-r.4   7457628   putative E3 ubiquitin-protein ligase LIN 
 ppo-m.4   7457628   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100815587   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100786098   putative E3 ubiquitin-protein ligase LIN 
 gma-u.5   100784106   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   11415917   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-u.5   100252832   putative E3 ubiquitin-protein ligase LIN 
 sly-u.5   101248542   putative E3 ubiquitin-protein ligase LIN 
 osa-u.5   4328428   putative E3 ubiquitin-protein ligase LIN-1 
 zma-u.5   100194083   uncharacterized LOC100194083 

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Top 50 coexpressed genes to 7457628 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457628 (ppo-u.5 coexpression data)

CoexMap"7457628"


ppoLOC7457628 | Entrez gene ID : 7457628    
Species ppo gma mtr vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi ath sbi cre
Paralog 3 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_024441723.1 [sequence] [blastp]
XP_052303666.1 [sequence] [blastp]
XP_052303667.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_024441723.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052303666.1)
nucl 4,  golg 2,  nucl_plas 2,  cyto 1,  vacu 1,  golg_plas 1  (predict for XP_052303667.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_024441723.1)
chlo 4  (predict for XP_052303666.1)
chlo 4  (predict for XP_052303667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457628

.
ppo-r.4
for
7457628

.
ppo-m.4
for
7457628

.
gma-u.5
for
100815587

.
gma-u.5
for
100786098

.
gma-u.5
for
100784106

.
mtr-u.5
for
11415917

.
vvi-u.5
for
100252832

.
sly-u.5
for
101248542

.
osa-u.5
for
4328428

.
zma-u.5
for
100194083

.


Ortholog ID: 11600
Species gma gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100786098 LOC100815587 LOC101248542 LOC4328428 LOC100194083 LOC100252832 LOC7457628 LOC11415917 LOC123132425 LOC123143997 LOC123402983 LOC107958319 LOC107897477 LOC8077169 LOC102590538 LOC102619841 LOC100846720 LOC107805698 LOC107796328
Function* putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC100194083 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 5
sbi00270 Cysteine and methionine metabolism 4
sbi00670 One carbon pool by folate 4
sbi00940 Phenylpropanoid biosynthesis 4
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100786098 100815587 101248542 4328428 100194083 100252832 7457628 11415917 123132425 123143997 123402983 107958319 107897477 8077169 102590538 102619841 100846720 107805698 107796328
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