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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107917515   transcription factor bHLH93 
 ghi-r.1   107891842   transcription factor bHLH61 
 ghi-r.1   107921665   transcription factor bHLH93 
 ghi-r.1   107905201   transcription factor bHLH93 
 ath-u.5   bHLH093   beta HLH protein 93 
 bra-r.6   103846794   transcription factor bHLH61 
 bra-r.6   103855309   transcription factor bHLH93 
 bra-r.6   103874000   transcription factor bHLH93 
 bna-r.1   125605827   transcription factor bHLH93-like 
 cit-r.1   102626641   transcription factor bHLH61 
 gma-u.5   100784380   transcription factor bHLH93-like 
 gma-u.5   100806571   transcription factor bHLH93 
 vvi-u.5   100267616   transcription factor bHLH93 
 ppo-u.5   7461834   transcription factor bHLH93 
 mtr-u.5   11409352   transcription factor bHLH93 
 mtr-u.5   112416762   transcription factor bHLH93-like 
 mtr-u.5   11423511   transcription factor bHLH93 
 sly-u.5   101251240   transcription factor bHLH93-like 
 sly-u.5   101250473   transcription factor bHLH93 
 sot-r.1   102596640   transcription factor bHLH93-like 
 sot-r.1   102597520   transcription factor bHLH93-like 
 sot-r.1   102588068   transcription factor bHLH93 
 nta-r.1   107820556   transcription factor bHLH93-like 
 nta-r.1   107788169   transcription factor bHLH93-like 
 zma-u.5   100276548   uncharacterized LOC100276548 
 tae-r.2   123167435   transcription factor bHLH93 
 hvu-r.1   123407711   transcription factor BHLH3-like 
 hvu-r.1   123443375   transcription factor bHLH93-like 

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Top 50 coexpressed genes to 107917515 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107917515 (ghi-r.1 coexpression data)

CoexMap"107917515"


ghiLOC107917515 | Entrez gene ID : 107917515    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu osa cre sbi bdi
Paralog 4 1 3 1 1 2 1 1 3 2 3 2 1 1 2 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016702344.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_016702344.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016702344.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107917515
ghi-r.1
for
107891842
ghi-r.1
for
107921665
ghi-r.1
for
107905201
ath-u.5
for
bHLH093
bra-r.6
for
103846794
bra-r.6
for
103855309
bra-r.6
for
103874000
bna-r.1
for
125605827
cit-r.1
for
102626641
gma-u.5
for
100784380
gma-u.5
for
100806571
vvi-u.5
for
100267616
ppo-u.5
for
7461834
mtr-u.5
for
11409352
mtr-u.5
for
112416762
mtr-u.5
for
11423511
sly-u.5
for
101251240
sly-u.5
for
101250473
sot-r.1
for
102596640
sot-r.1
for
102597520
sot-r.1
for
102588068
nta-r.1
for
107820556
nta-r.1
for
107788169
zma-u.5
for
100276548
tae-r.2
for
123167435
hvu-r.1
for
123407711
hvu-r.1
for
123443375


Ortholog ID: 2101
Species ghi ghi ghi ath bra bra bra bna bna cit gma gma gma vvi ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta zma tae hvu hvu
Symbol LOC107891842 LOC107921665 LOC107957853 bHLH093 LOC103846794 LOC103855309 LOC103874000 LOC106347821 LOC106348110 LOC102626641 LOC100790319 LOC100784145 LOC100812578 LOC100267616 LOC7461834 LOC11409352 LOC112416762 LOC11423511 LOC101251240 LOC101250473 LOC101262198 LOC102596640 LOC102597520 LOC102588068 LOC107820556 LOC107807794 LOC107832367 LOC100276548 LOC123167435 LOC123407711 LOC123443375
Function* transcription factor bHLH61 transcription factor bHLH93 transcription factor bHLH93 beta HLH protein 93 transcription factor bHLH61 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH61 transcription factor bHLH93 transcription factor bHLH93-like transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93 transcription factor bHLH93-like transcription factor bHLH93 transcription factor bHLH93-like transcription factor bHLH93 NO FLOWERING IN SHORT DAY-like transcription factor transcription factor bHLH93-like transcription factor bHLH93-like transcription factor bHLH93 transcription factor bHLH93-like transcription factor bHLH93-like transcription factor bHLH93-like uncharacterized LOC100276548 transcription factor bHLH93 transcription factor BHLH3-like transcription factor bHLH93-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00100 Steroid biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 2
ppo00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00785 Lipoic acid metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta00270 Cysteine and methionine metabolism 2
nta00543 Exopolysaccharide biosynthesis 2
nta00920 Sulfur metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891842 107921665 107957853 836690 103846794 103855309 103874000 106347821 106348110 102626641 100790319 100784145 100812578 100267616 7461834 11409352 112416762 11423511 101251240 101250473 101262198 102596640 102597520 102588068 107820556 107807794 107832367 100276548 123167435 123407711 123443375
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