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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920016   growth-regulating factor 4 
 ghi-r.1   121225139   growth-regulating factor 4 
 ghi-r.1   107893357   growth-regulating factor 6 
 ghi-r.1   107897434   growth-regulating factor 5 
 ath-u.5   GRF5   growth-regulating factor 5 
 bra-r.6   103870079   growth-regulating factor 5 
 bna-r.1   106381127   growth-regulating factor 5-like 
 bna-r.1   106389165   growth-regulating factor 5-like 
 cit-r.1   102627866   growth-regulating factor 4-like 
 cit-r.1   102612529   growth-regulating factor 6 
 cit-r.1   102611455   growth-regulating factor 4-like 
 gma-u.5   GRF16   growth-regulating factor 
 gma-u.5   GRF7   growth-regulating factor 
 gma-u.5   GRF17   growth-regulating factor 
 vvi-u.5   100247998   growth-regulating factor 1 
 vvi-u.5   100259737   growth-regulating factor 4 
 ppo-u.5   18096998   growth-regulating factor 5 
 mtr-u.5   25494182   growth-regulating factor 1 
 mtr-u.5   25486490   growth-regulating factor 1 
 mtr-u.5   25479294   growth-regulating factor 4 
 sly-u.5   101245679   growth-regulating factor 4-like 
 sly-u.5   101255511   growth-regulating factor 6-like 
 sly-u.5   101263989   growth-regulating factor 4 
 sot-r.1   102580024   growth-regulating factor 4-like 
 sot-r.1   102584254   growth-regulating factor 4-like 
 sot-r.1   102591630   growth-regulating factor 4-like 
 nta-r.1   107825286   growth-regulating factor 4-like 
 nta-r.1   107772772   growth-regulating factor 3-like 
 nta-r.1   107774428   growth-regulating factor 1-like 
 osa-u.5   4330436   growth-regulating factor 4-like 
 osa-u.5   4330903   growth-regulating factor 1-like 
 osa-u.5   4336879   growth-regulating factor 3-like 
 zma-u.5   103627811   growth-regulating factor 1-like 
 zma-u.5   100125641   growth-regulating factor 7-like 
 zma-u.5   100125644   Growth-regulating factor 6 
 tae-r.2   123138478   growth-regulating factor 1 
 tae-r.2   123046556   growth-regulating factor 3 
 tae-r.2   123054413   growth-regulating factor 3 
 hvu-r.1   123427726   growth-regulating factor 3-like 
 hvu-r.1   123403172   growth-regulating factor 1-like 
 hvu-r.1   123404808   growth-regulating factor 4-like 
 sbi-r.1   8066917   growth-regulating factor 5 
 sbi-r.1   8070748   growth-regulating factor 2 
 sbi-r.1   8081935   growth-regulating factor 1 
 bdi-r.1   100833962   growth-regulating factor 3 
 bdi-r.1   100836260   growth-regulating factor 4 
 bdi-r.1   100842886   growth-regulating factor 5 

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Top 50 coexpressed genes to 107920016 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920016 (ghi-r.1 coexpression data)

CoexMap"107920016"


ghiLOC107920016 | Entrez gene ID : 107920016    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 3 3 2 1 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (617 genes)  IEA  
GO:0032502 [list] [network] developmental process  (1029 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016704987.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016704987.2)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_016704987.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920016
ghi-r.1
for
121225139
ghi-r.1
for
107893357
ghi-r.1
for
107897434
ath-u.5
for
GRF5
bra-r.6
for
103870079
bna-r.1
for
106381127
bna-r.1
for
106389165
cit-r.1
for
102627866
cit-r.1
for
102612529
cit-r.1
for
102611455
gma-u.5
for
GRF16
gma-u.5
for
GRF7
gma-u.5
for
GRF17
vvi-u.5
for
100247998
vvi-u.5
for
100259737
ppo-u.5
for
18096998
mtr-u.5
for
25494182
mtr-u.5
for
25486490
mtr-u.5
for
25479294
sly-u.5
for
101245679
sly-u.5
for
101255511
sly-u.5
for
101263989
sot-r.1
for
102580024
sot-r.1
for
102584254
sot-r.1
for
102591630
nta-r.1
for
107825286
nta-r.1
for
107772772
nta-r.1
for
107774428
osa-u.5
for
4330436
osa-u.5
for
4330903
osa-u.5
for
4336879
zma-u.5
for
103627811
zma-u.5
for
100125641
zma-u.5
for
100125644
tae-r.2
for
123138478
tae-r.2
for
123046556
tae-r.2
for
123054413
hvu-r.1
for
123427726
hvu-r.1
for
123403172
hvu-r.1
for
123404808
sbi-r.1
for
8066917
sbi-r.1
for
8070748
sbi-r.1
for
8081935
bdi-r.1
for
100833962
bdi-r.1
for
100836260
bdi-r.1
for
100842886


Ortholog ID: 673
Species ghi ghi ghi ath bra bna bna cit cit cit gma gma gma vvi vvi ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC107950614 LOC107958784 LOC107951879 GRF5 LOC103870079 LOC106381127 LOC111207183 LOC102627866 LOC102612529 LOC107177665 GRF11 GRF13 GRF15 LOC100247998 LOC100259737 LOC18094082 LOC25486490 LOC25479294 LOC11429462 LOC101255511 LOC101263989 LOC101267047 LOC102580024 LOC102591630 LOC102601897 LOC107772772 LOC107821683 LOC107812877 LOC4330436 LOC4330903 LOC103627811 GRF1 LOC100101536 LOC123128103 LOC123128605 LOC123166486 LOC123404808 LOC123408772 LOC8070748 LOC8081935 LOC8072276 LOC100836260 LOC100842886 LOC100845697
Function* growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 5 growth-regulating factor 5-like growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 6 growth-regulating factor 5 growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 6-like growth-regulating factor 4 growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 3-like growth-regulating factor 4-like growth-regulating factor 4 growth-regulating factor 4-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 3-like growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 5-like growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
hvu04070 Phosphatidylinositol signaling system 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107950614 107958784 107951879 820609 103870079 106381127 111207183 102627866 102612529 107177665 100787567 100787226 100781613 100247998 100259737 18094082 25486490 25479294 11429462 101255511 101263989 101267047 102580024 102591630 102601897 107772772 107821683 107812877 4330436 4330903 103627811 100101535 100101536 123128103 123128605 123166486 123404808 123408772 8070748 8081935 8072276 100836260 100842886 100845697
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