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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922428   argininosuccinate lyase, chloroplastic 
 ghi-r.1   107917934   argininosuccinate lyase, chloroplastic 
 ath-u.5   AT5G10920   L-Aspartase-like family protein 
 bra-r.6   103846769   argininosuccinate lyase, chloroplastic 
 bna-r.1   106372444   argininosuccinate lyase, chloroplastic-like 
 bna-r.1   106415147   argininosuccinate lyase, chloroplastic 
 cit-r.1   102618891   argininosuccinate lyase, chloroplastic 
 gma-u.5   100796544   argininosuccinate lyase, chloroplastic 
 gma-u.5   100780483   argininosuccinate lyase, chloroplastic 
 vvi-u.5   100262660   argininosuccinate lyase, chloroplastic 
 ppo-u.5   7467203   argininosuccinate lyase, chloroplastic 
 mtr-u.5   11423209   argininosuccinate lyase, chloroplastic 
 sly-u.5   AS   argininosuccinate lyase 
 sot-r.1   102578683   argininosuccinate lyase, chloroplastic 
 nta-r.1   107783840   argininosuccinate lyase, chloroplastic 
 nta-r.1   107813406   argininosuccinate lyase, chloroplastic-like 
 osa-u.5   4332596   argininosuccinate lyase, chloroplastic 
 zma-u.5   100191977   argininosuccinate lyase 
 tae-r.2   123092371   argininosuccinate lyase, chloroplastic 
 tae-r.2   123085657   argininosuccinate lyase, chloroplastic 
 tae-r.2   123097688   argininosuccinate lyase, chloroplastic 
 hvu-r.1   123448832   argininosuccinate lyase, chloroplastic 
 sbi-r.1   8081084   argininosuccinate lyase, chloroplastic 
 bdi-r.1   100828562   argininosuccinate lyase, chloroplastic 
 cre-r.1   CHLRE_01g021251v5   uncharacterized protein 

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Top 50 coexpressed genes to 107922428 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922428 (ghi-r.1 coexpression data)

CoexMap"107922428"


ghiLOC107922428 | Entrez gene ID : 107922428    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00220 [list] [network] Arginine biosynthesis (92 genes)
ghi00250 [list] [network] Alanine, aspartate and glutamate metabolism (131 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0042450 [list] [network] L-arginine biosynthetic process via ornithine  (4 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004056 [list] [network] argininosuccinate lyase activity  (2 genes)  IEA  
Protein XP_016707951.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_016707951.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016707951.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922428
ghi-r.1
for
107917934
ath-u.5
for
AT5G10920
bra-r.6
for
103846769
bna-r.1
for
106372444
bna-r.1
for
106415147
cit-r.1
for
102618891
gma-u.5
for
100796544
gma-u.5
for
100780483
vvi-u.5
for
100262660
ppo-u.5
for
7467203
mtr-u.5
for
11423209
sly-u.5
for
AS
sot-r.1
for
102578683
nta-r.1
for
107783840
nta-r.1
for
107813406
osa-u.5
for
4332596
zma-u.5
for
100191977
tae-r.2
for
123092371
tae-r.2
for
123085657
tae-r.2
for
123097688
hvu-r.1
for
123448832
sbi-r.1
for
8081084
bdi-r.1
for
100828562
cre-r.1
for
CHLRE_01g021251v5


Ortholog ID: 10290
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107922428 LOC107917934 AT5G10920 LOC103846769 LOC106372444 LOC106415147 LOC102618891 LOC100796544 LOC100780483 LOC100262660 LOC7467203 LOC11423209 AS LOC102578683 LOC107783840 LOC107813406 LOC4332596 LOC100191977 LOC123092371 LOC123085657 LOC123097688 LOC123448832 LOC8081084 LOC100828562 CHLRE_01g021251v5
Function* argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic L-Aspartase-like family protein argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic-like argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic-like argininosuccinate lyase, chloroplastic argininosuccinate lyase argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 12
ath00230 Purine metabolism 5
ath00300 Lysine biosynthesis 5
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra01230 Biosynthesis of amino acids 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00230 Purine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 8
bna00230 Purine metabolism 6
bna01232 Nucleotide metabolism 6
bna01240 Biosynthesis of cofactors 6
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00230 Purine metabolism 5
bna01232 Nucleotide metabolism 5
bna01240 Biosynthesis of cofactors 5
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 8
gma01200 Carbon metabolism 8
gma01230 Biosynthesis of amino acids 6
gma00010 Glycolysis / Gluconeogenesis 5
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00010 Glycolysis / Gluconeogenesis 5
gma01200 Carbon metabolism 5
gma00220 Arginine biosynthesis 4
gma00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03082 ATP-dependent chromatin remodeling 3
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr04075 Plant hormone signal transduction 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00220 Arginine biosynthesis 3
sly01240 Biosynthesis of cofactors 3
sly01210 2-Oxocarboxylic acid metabolism 2
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot01230 Biosynthesis of amino acids 3
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 3
nta00250 Alanine, aspartate and glutamate metabolism 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 3
nta00250 Alanine, aspartate and glutamate metabolism 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 11
osa00220 Arginine biosynthesis 4
osa00250 Alanine, aspartate and glutamate metabolism 4
osa00230 Purine metabolism 4
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma03018 RNA degradation 3
zma03010 Ribosome 3
zma03015 mRNA surveillance pathway 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00220 Arginine biosynthesis 8
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 5
tae01230 Biosynthesis of amino acids 5
tae00190 Oxidative phosphorylation 5
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae01210 2-Oxocarboxylic acid metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 9
hvu00220 Arginine biosynthesis 4
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00300 Lysine biosynthesis 4
bdi03010 Ribosome 4
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 10
cre01230 Biosynthesis of amino acids 8
cre00250 Alanine, aspartate and glutamate metabolism 6
cre01210 2-Oxocarboxylic acid metabolism 5
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922428 107917934 830959 103846769 106372444 106415147 102618891 100796544 100780483 100262660 7467203 11423209 101255089 102578683 107783840 107813406 4332596 100191977 123092371 123085657 123097688 123448832 8081084 100828562 5715208
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