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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922556   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ghi-r.1   121229580   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ath-u.5   AT3G57680   Peptidase S41 family protein 
 bra-r.6   103841674   carboxyl-terminal-processing peptidase 3, chloroplastic 
 bna-r.1   106376608   carboxyl-terminal-processing peptidase 3, chloroplastic-like 
 bna-r.1   125578464   carboxyl-terminal-processing peptidase 3, chloroplastic-like 
 cit-r.1   102624481   carboxyl-terminal-processing peptidase 3, chloroplastic 
 gma-u.5   100813025   carboxyl-terminal-processing peptidase 3, chloroplastic 
 vvi-u.5   100260662   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ppo-u.5   7474665   carboxyl-terminal-processing peptidase 3, chloroplastic 
 mtr-u.5   25483369   carboxyl-terminal-processing peptidase 3, chloroplastic 
 sly-u.5   101257542   carboxyl-terminal-processing peptidase 3, chloroplastic 
 sot-r.1   102604680   carboxyl-terminal-processing peptidase 3, chloroplastic 
 nta-r.1   107769013   carboxyl-terminal-processing peptidase 3, chloroplastic 
 nta-r.1   107814610   carboxyl-terminal-processing peptidase 3, chloroplastic 
 osa-u.5   4340883   carboxyl-terminal-processing peptidase 3, chloroplastic 
 zma-u.5   100282363   carboxyl-terminal-processing protease 
 tae-r.2   123167775   carboxyl-terminal-processing peptidase 3, chloroplastic 
 tae-r.2   123160938   carboxyl-terminal-processing peptidase 3, chloroplastic 
 tae-r.2   123151037   carboxyl-terminal-processing peptidase 3, chloroplastic 
 hvu-r.1   123411105   carboxyl-terminal-processing peptidase 3, chloroplastic 
 sbi-r.1   8078250   carboxyl-terminal-processing peptidase 3, chloroplastic 
 bdi-r.1   100839585   carboxyl-terminal-processing peptidase 3, chloroplastic 
 cre-r.1   CHLRE_10g453807v5   uncharacterized protein 

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Top 50 coexpressed genes to 107922556 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922556 (ghi-r.1 coexpression data)

CoexMap"107922556"


ghiLOC107922556 | Entrez gene ID : 107922556    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (1903 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2209 genes)  IEA  
GO CC
GO:0030288 [list] [network] outer membrane-bounded periplasmic space  (2 genes)  IEA  
GO MF
GO:0008236 [list] [network] serine-type peptidase activity  (429 genes)  IEA  
GO:0004175 [list] [network] endopeptidase activity  (783 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016708128.2 [sequence] [blastp]
XP_040943509.1 [sequence] [blastp]
XP_040943510.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  vacu 1  (predict for XP_016708128.2)
cyto 7,  nucl 2  (predict for XP_040943509.1)
cyto 6,  nucl 1,  pero 1,  mito 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040943510.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016708128.2)
chlo 7  (predict for XP_040943509.1)
other 6  (predict for XP_040943510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922556
ghi-r.1
for
121229580
ath-u.5
for
AT3G57680
bra-r.6
for
103841674
bna-r.1
for
106376608
bna-r.1
for
125578464
cit-r.1
for
102624481
gma-u.5
for
100813025
vvi-u.5
for
100260662
ppo-u.5
for
7474665
mtr-u.5
for
25483369
sly-u.5
for
101257542
sot-r.1
for
102604680
nta-r.1
for
107769013
nta-r.1
for
107814610
osa-u.5
for
4340883
zma-u.5
for
100282363
tae-r.2
for
123167775
tae-r.2
for
123160938
tae-r.2
for
123151037
hvu-r.1
for
123411105
sbi-r.1
for
8078250
bdi-r.1
for
100839585
cre-r.1
for
CHLRE_10g453807v5


Ortholog ID: 10829
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107922556 LOC121229580 AT3G57680 LOC103841674 LOC106376608 LOC125578464 LOC102624481 LOC100813025 LOC100260662 LOC7474665 LOC25483369 LOC101257542 LOC102604680 LOC107769013 LOC107814610 LOC4340883 LOC100282363 LOC123167775 LOC123160938 LOC123151037 LOC123411105 LOC8078250 LOC100839585 CHLRE_10g453807v5
Function* carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic Peptidase S41 family protein carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic-like carboxyl-terminal-processing peptidase 3, chloroplastic-like carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing protease carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta00902 Monoterpenoid biosynthesis 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta00270 Cysteine and methionine metabolism 3
nta00902 Monoterpenoid biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae04712 Circadian rhythm - plant 2
tae00010 Glycolysis / Gluconeogenesis 2
tae00040 Pentose and glucuronate interconversions 2
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00040 Pentose and glucuronate interconversions 4
tae00053 Ascorbate and aldarate metabolism 4
tae00561 Glycerolipid metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00040 Pentose and glucuronate interconversions 4
tae00053 Ascorbate and aldarate metabolism 4
tae00561 Glycerolipid metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922556 121229580 824937 103841674 106376608 125578464 102624481 100813025 100260662 7474665 25483369 101257542 102604680 107769013 107814610 4340883 100282363 123167775 123160938 123151037 123411105 8078250 100839585 5723907
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