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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g453807v5   uncharacterized protein 
 ath-u.5   AT3G57680   Peptidase S41 family protein 
 gma-u.5   100813025   carboxyl-terminal-processing peptidase 3, chloroplastic 
 sly-u.5   101257542   carboxyl-terminal-processing peptidase 3, chloroplastic 
 osa-u.5   4340883   carboxyl-terminal-processing peptidase 3, chloroplastic 
 zma-u.5   100282363   carboxyl-terminal-processing protease 
 bra-r.6   103841674   carboxyl-terminal-processing peptidase 3, chloroplastic 
 vvi-u.5   100260662   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ppo-u.5   7474665   carboxyl-terminal-processing peptidase 3, chloroplastic 
 mtr-u.5   25483369   carboxyl-terminal-processing peptidase 3, chloroplastic 
 tae-r.2   123151037   carboxyl-terminal-processing peptidase 3, chloroplastic 
 tae-r.2   123160938   carboxyl-terminal-processing peptidase 3, chloroplastic 
 tae-r.2   123167775   carboxyl-terminal-processing peptidase 3, chloroplastic 
 hvu-r.1   123411105   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ghi-r.1   121229580   carboxyl-terminal-processing peptidase 3, chloroplastic 
 ghi-r.1   107922556   carboxyl-terminal-processing peptidase 3, chloroplastic 
 bna-r.1   106376608   carboxyl-terminal-processing peptidase 3, chloroplastic-like 
 bna-r.1   125578464   carboxyl-terminal-processing peptidase 3, chloroplastic-like 
 sbi-r.1   8078250   carboxyl-terminal-processing peptidase 3, chloroplastic 
 sot-r.1   102604680   carboxyl-terminal-processing peptidase 3, chloroplastic 
 cit-r.1   102624481   carboxyl-terminal-processing peptidase 3, chloroplastic 
 bdi-r.1   100839585   carboxyl-terminal-processing peptidase 3, chloroplastic 
 nta-r.1   107814610   carboxyl-terminal-processing peptidase 3, chloroplastic 
 nta-r.1   107769013   carboxyl-terminal-processing peptidase 3, chloroplastic 

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Top 50 coexpressed genes to CHLRE_10g453807v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g453807v5 (cre-r.1 coexpression data)

CoexMap"5723907"


creCHLRE_10g453807v5 | Entrez gene ID : 5723907      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (404 genes)  IEA  
GO CC
GO MF
GO:0008236 [list] [network] serine-type peptidase activity  (102 genes)  IEA  
GO:0004175 [list] [network] endopeptidase activity  (183 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042920412.1 [sequence] [blastp]
XP_042920413.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_042920412.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_042920413.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_042920412.1)
chlo 7  (predict for XP_042920413.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g453807v5
ath-u.5
for
AT3G57680
gma-u.5
for
100813025
sly-u.5
for
101257542
osa-u.5
for
4340883
zma-u.5
for
100282363
bra-r.6
for
103841674
vvi-u.5
for
100260662
ppo-u.5
for
7474665
mtr-u.5
for
25483369
tae-r.2
for
123151037
tae-r.2
for
123160938
tae-r.2
for
123167775
hvu-r.1
for
123411105
ghi-r.1
for
121229580
ghi-r.1
for
107922556
bna-r.1
for
106376608
bna-r.1
for
125578464
sbi-r.1
for
8078250
sot-r.1
for
102604680
cit-r.1
for
102624481
bdi-r.1
for
100839585
nta-r.1
for
107814610
nta-r.1
for
107769013


Ortholog ID: 10829
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g453807v5 AT3G57680 LOC100813025 LOC101257542 LOC4340883 LOC100282363 LOC103841674 LOC100260662 LOC7474665 LOC25483369 LOC123151037 LOC123160938 LOC123167775 LOC123411105 LOC121229580 LOC107922556 LOC106376608 LOC125578464 LOC8078250 LOC102604680 LOC102624481 LOC100839585 LOC107814610 LOC107769013
Function* uncharacterized protein Peptidase S41 family protein carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing protease carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic-like carboxyl-terminal-processing peptidase 3, chloroplastic-like carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic carboxyl-terminal-processing peptidase 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00040 Pentose and glucuronate interconversions 4
tae00053 Ascorbate and aldarate metabolism 4
tae00561 Glycerolipid metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00040 Pentose and glucuronate interconversions 4
tae00053 Ascorbate and aldarate metabolism 4
tae00561 Glycerolipid metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae04712 Circadian rhythm - plant 2
tae00010 Glycolysis / Gluconeogenesis 2
tae00040 Pentose and glucuronate interconversions 2
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta00270 Cysteine and methionine metabolism 3
nta00902 Monoterpenoid biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta00902 Monoterpenoid biosynthesis 2
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723907 824937 100813025 101257542 4340883 100282363 103841674 100260662 7474665 25483369 123151037 123160938 123167775 123411105 121229580 107922556 106376608 125578464 8078250 102604680 102624481 100839585 107814610 107769013
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