ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107922925	60S ribosomal protein L8-3
ath-u.5	EMB2296	Ribosomal protein L2 family
ath-u.5	AT4G36130	Ribosomal protein L2 family
gma-u.5	RPL2	ribosomal protein L2
gma-u.5	100527838	60S ribosomal protein L8-1
gma-u.5	100798311	60S ribosomal protein L8-3
vvi-u.5	100258586	60S ribosomal protein L8-like
vvi-u.5	100248750	large ribosomal subunit protein uL2
vvi-u.5	100247214	large ribosomal subunit protein uL2
ppo-u.5	18099210	60S ribosomal protein L8-3
ppo-u.5	18109327	60S ribosomal protein L8-1
ppo-u.5	18109328	60S ribosomal protein L8-1
mtr-u.5	11436934	60S ribosomal protein L8-3
mtr-u.5	11424816	60S ribosomal protein L8-3
sly-u.5	RPL8	ribosomal protein L2
sly-u.5	101264138	large ribosomal subunit protein uL2
sly-u.5	101265004	large ribosomal subunit protein uL2
osa-u.5	4352560	large ribosomal subunit protein uL2
zma-u.5	100216796	60S ribosomal protein L8
zma-u.5	100191681	60S ribosomal protein L8
zma-u.5	110485087	uncharacterized LOC110485087

Annotation

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation

(214 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(467 genes)	IEA
GO:0005840 [list] [network] ribosome	(1110 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(1075 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3053 genes)	IEA

Protein

XP_016708618.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 4, mito 1

(predict for XP_016708618.1)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_016708618.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107922925	ath-u.5 for EMB2296	ath-u.5 for AT4G36130	gma-u.5 for RPL2	gma-u.5 for 100527838	gma-u.5 for 100798311	vvi-u.5 for 100258586	vvi-u.5 for 100248750	vvi-u.5 for 100247214	ppo-u.5 for 18099210	ppo-u.5 for 18109327	ppo-u.5 for 18109328	mtr-u.5 for 11436934	mtr-u.5 for 11424816	sly-u.5 for RPL8	sly-u.5 for 101264138	sly-u.5 for 101265004	osa-u.5 for 4352560	zma-u.5 for 100216796	zma-u.5 for 100191681	zma-u.5 for 110485087

Ortholog

Ortholog ID: 1564

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EMB2296

RPL2

RPL8

Function^*

60S ribosomal protein L8-3

Ribosomal protein L2 family

60S ribosomal protein L8-3

60S ribosomal protein L8-1

60S ribosomal protein L8-3-like

60S ribosomal protein L8-1

60S ribosomal protein L8

60S ribosomal protein L8-3

ribosomal protein L2

60S ribosomal protein L8-like

large ribosomal subunit protein uL2

60S ribosomal protein L8-3

60S ribosomal protein L8-1

60S ribosomal protein L8-3

large ribosomal subunit protein uL2

ribosomal protein L2

60S ribosomal protein L8-like

large ribosomal subunit protein uL2-like

large ribosomal subunit protein uL2

uncharacterized LOC110485087

60S ribosomal protein L8

ribosomal protein L8

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	12
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	14
gma04120	Ubiquitin mediated proteolysis	4
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15
gma04120	Ubiquitin mediated proteolysis	4
gma04145	Phagosome	2
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	15
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	15
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	9
sbi04120	Ubiquitin mediated proteolysis	5
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	21

Expression

Expression pattern

Entrez Gene ID^*

107897605

107914262

829770

816314

103834984

103874169

106349324

111215659

102614671

102626558

100802137

547677

100258586

100247214

18099210

18109327

11424816

11436934

101264138

544079

102579483

102583499

107816448

107785477

4352560

110485087

100191681

123110702

123400024

8057923

8068949

100835896

5718493

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107922925 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107922925 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	3	3	3	2	3	1	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107922925 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107922925 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**