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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G61520   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G28370   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G28460   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812269   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 vvi-u.5   100250006   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 ppo-u.5   7459898   pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5   112420245   pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5   25502083   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 sly-u.5   101265078   pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like 
 osa-u.5   4340651   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 zma-u.5   109940202   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 

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Top 50 coexpressed genes to AT3G61520 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G61520 (ath-u.5 coexpression data)

CoexMap"107923562"


ghiLOC107923562 | Entrez gene ID : 107923562    
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016709237.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for XP_016709237.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_016709237.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT3G61520
ath-u.5
for
AT5G28370
ath-u.5
for
AT5G28460
gma-u.5
for
100812269
vvi-u.5
for
100250006
ppo-u.5
for
7459898
mtr-u.5
for
112420245
mtr-u.5
for
25502083
sly-u.5
for
101265078
osa-u.5
for
4340651
zma-u.5
for
109940202


Ortholog ID: 7263
Species ath ath bra bna bna cit cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi
Symbol AT5G28370 AT5G28460 LOC103830304 LOC111213661 LOC106353270 LOC102622512 LOC127901499 LOC100812269 LOC100250006 LOC7459898 LOC25502083 LOC101265078 LOC102585323 LOC107810060 LOC107807319 LOC4340651 LOC109940202 LOC123150073 LOC123408919 LOC8065723
Function* Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At5g28460-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like uncharacterized LOC107810060 uncharacterized LOC107807319 pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832922 832933 103830304 111213661 106353270 102622512 127901499 100812269 100250006 7459898 25502083 101265078 102585323 107810060 107807319 4340651 109940202 123150073 123408919 8065723
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