Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065723   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 zma-u.5   109940202   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 osa-u.5   4340651   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 ath-u.5   AT3G61520   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G28370   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G28460   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812269   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 sly-u.5   101265078   pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like 
 vvi-u.5   100250006   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 ppo-u.5   7459898   pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5   112420245   pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5   25502083   pentatricopeptide repeat-containing protein At3g61520, mitochondrial 

close


Top 50 coexpressed genes to 8065723 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8065723 (sbi-r.1 coexpression data)

CoexMap"8065723"


sbiLOC8065723 | Entrez gene ID : 8065723    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 3 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021305618.1 [sequence] [blastp]
XP_021305619.1 [sequence] [blastp]
XP_021305620.1 [sequence] [blastp]
XP_021305621.1 [sequence] [blastp]
XP_021305622.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_021305618.1)
chlo 7,  mito 3  (predict for XP_021305619.1)
chlo 7,  mito 3  (predict for XP_021305620.1)
chlo 7,  mito 3  (predict for XP_021305621.1)
chlo 8,  mito 2  (predict for XP_021305622.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_021305618.1)
mito 7,  chlo 3  (predict for XP_021305619.1)
mito 7,  chlo 3  (predict for XP_021305620.1)
mito 7,  chlo 3  (predict for XP_021305621.1)
mito 7,  chlo 3  (predict for XP_021305622.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065723

.
zma-u.5
for
109940202

.
osa-u.5
for
4340651

.
ath-u.5
for
AT3G61520

.
ath-u.5
for
AT5G28370

.
ath-u.5
for
AT5G28460

.
gma-u.5
for
100812269

.
sly-u.5
for
101265078

.
vvi-u.5
for
100250006

.
ppo-u.5
for
7459898

.
mtr-u.5
for
112420245

.
mtr-u.5
for
25502083

.


Ortholog ID: 7263
Species ath ath gma sly osa zma bra vvi ppo mtr tae hvu bna bna sbi sot cit cit nta nta
Symbol AT5G28370 AT5G28460 LOC100812269 LOC101265078 LOC4340651 LOC109940202 LOC103830304 LOC100250006 LOC7459898 LOC25502083 LOC123150073 LOC123408919 LOC111213661 LOC106353270 LOC8065723 LOC102585323 LOC102622512 LOC127901499 LOC107810060 LOC107807319
Function* Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At5g28460-like uncharacterized LOC107810060 uncharacterized LOC107807319
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832922 832933 100812269 101265078 4340651 109940202 103830304 100250006 7459898 25502083 123150073 123408919 111213661 106353270 8065723 102585323 102622512 127901499 107810060 107807319
The preparation time of this page was 0.1 [sec].