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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123408919  pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like 
 osa-u.5  4340651  pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 zma-u.5  109940202  pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 ath-u.5  AT3G61520  Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5  AT5G28370  Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5  AT5G28460  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100812269  pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 sly-u.5  101265078  pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like 
 vvi-u.5  100250006  pentatricopeptide repeat-containing protein At3g61520, mitochondrial 
 ppo-u.5  7459898  pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5  112420245  pentatricopeptide repeat-containing protein At5g28460 
 mtr-u.5  25502083  pentatricopeptide repeat-containing protein At3g61520, mitochondrial 

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Top 50 coexpressed genes to 123408919 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123408919 (hvu-r.1 coexpression data)

CoexMap"123408919"


hvuLOC123408919 | Entrez gene ID : 123408919
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 3 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044957878.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4,  cyto_mito 2  (predict for XP_044957878.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044957878.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123408919


osa-u.5
for
4340651


zma-u.5
for
109940202


ath-u.5
for
AT3G61520


ath-u.5
for
AT5G28370


ath-u.5
for
AT5G28460


gma-u.5
for
100812269


sly-u.5
for
101265078


vvi-u.5
for
100250006


ppo-u.5
for
7459898


mtr-u.5
for
112420245


mtr-u.5
for
25502083



Ortholog ID: 7263
Species hvu tae osa zma sbi ath ath gma sly bra vvi ppo mtr bna bna sot cit cit nta nta
Symbol LOC123408919 LOC123150073 LOC4340651 LOC109940202 LOC8065723 AT5G28370 AT5G28460 LOC100812269 LOC101265078 LOC103830304 LOC100250006 LOC7459898 LOC25502083 LOC111213661 LOC106353270 LOC102585323 LOC102622512 LOC127901499 LOC107810060 LOC107807319
Function* pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At3g61520, mitochondrial pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like pentatricopeptide repeat-containing protein At5g28460 pentatricopeptide repeat-containing protein At5g28460-like uncharacterized LOC107810060 uncharacterized LOC107807319
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123408919 123150073 4340651 109940202 8065723 832922 832933 100812269 101265078 103830304 100250006 7459898 25502083 111213661 106353270 102585323 102622512 127901499 107810060 107807319
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