ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107924401	uncharacterized LOC107924401
ghi-r.1	107945465	uncharacterized LOC107945465
ath-u.5	AT3G49840	transmembrane protein (DUF2215)
ath-u.5	AT5G67610	transmembrane protein (DUF2215)
bra-r.6	103874036	uncharacterized LOC103874036
bna-r.1	106348167	uncharacterized LOC106348167
bna-r.1	BNAC03G48660D	uncharacterized BNAC03G48660D
cit-r.1	102626832	uncharacterized LOC102626832
gma-u.5	100810145	uncharacterized LOC100810145
gma-u.5	100795492	uncharacterized LOC100795492
vvi-u.5	104878704	uncharacterized LOC104878704
ppo-u.5	18101246	uncharacterized LOC18101246
mtr-u.5	11420567	uncharacterized LOC11420567
sly-u.5	101248544	uncharacterized LOC101248544
sot-r.1	102586574	uncharacterized LOC102586574
nta-r.1	107761130	uncharacterized LOC107761130
nta-r.1	107803577	uncharacterized LOC107803577
osa-u.5	4333173	uncharacterized LOC4333173
zma-u.5	100216980	uncharacterized LOC100216980
tae-r.2	123064570	uncharacterized LOC123064570
tae-r.2	123182759	uncharacterized LOC123182759
tae-r.2	123141797	uncharacterized LOC123141797
hvu-r.1	123448624	uncharacterized LOC123448624
sbi-r.1	8066230	uncharacterized LOC8066230
bdi-r.1	100831104	uncharacterized LOC100831104

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040940031.1 [sequence] [blastp]
XP_040940032.1 [sequence] [blastp]
XP_040940033.1 [sequence] [blastp]
XP_040940034.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, nucl 3, E.R._plas 3	(predict for XP_040940031.1)
plas 4, chlo 2, nucl 2, E.R._plas 2	(predict for XP_040940032.1)
plas 9	(predict for XP_040940033.1)
plas 9	(predict for XP_040940034.1)

Subcellular
localization
TargetP

scret 9, other 3	(predict for XP_040940031.1)
scret 9, other 3	(predict for XP_040940032.1)
scret 9	(predict for XP_040940033.1)
scret 9	(predict for XP_040940034.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107924401	ghi-r.1 for 107945465	ath-u.5 for AT3G49840	ath-u.5 for AT5G67610	bra-r.6 for 103874036	bna-r.1 for 106348167	bna-r.1 for BNAC03G48660D	cit-r.1 for 102626832	gma-u.5 for 100810145	gma-u.5 for 100795492	vvi-u.5 for 104878704	ppo-u.5 for 18101246	mtr-u.5 for 11420567	sly-u.5 for 101248544	sot-r.1 for 102586574	nta-r.1 for 107761130	nta-r.1 for 107803577	osa-u.5 for 4333173	zma-u.5 for 100216980	tae-r.2 for 123064570	tae-r.2 for 123182759	tae-r.2 for 123141797	hvu-r.1 for 123448624	sbi-r.1 for 8066230	bdi-r.1 for 100831104

Ortholog

Ortholog ID: 9528

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107924401

uncharacterized LOC107945465

transmembrane protein (DUF2215)

uncharacterized LOC103874036

uncharacterized LOC106348167

uncharacterized BNAC03G48660D

uncharacterized LOC102626832

uncharacterized LOC100810145

uncharacterized LOC100795492

uncharacterized LOC104878704

uncharacterized LOC18101246

uncharacterized LOC11420567

uncharacterized LOC101248544

uncharacterized LOC102586574

uncharacterized LOC107761130

uncharacterized LOC107803577

uncharacterized LOC4333173

uncharacterized LOC100216980

uncharacterized LOC123064570

uncharacterized LOC123182759

uncharacterized LOC123141797

uncharacterized LOC123448624

uncharacterized LOC8066230

uncharacterized LOC100831104

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma03410	Base excision repair	3
gma03460	Fanconi anemia pathway	2
gma03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	2
gma03410	Base excision repair	2
gma03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae03022	Basal transcription factors	3
tae03420	Nucleotide excision repair	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae03013	Nucleocytoplasmic transport	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2
sbi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

107924401

107945465

824146

836897

103874036

106348167

106443991

102626832

100810145

100795492

104878704

18101246

11420567

101248544

102586574

107761130

107803577

4333173

100216980

123064570

123182759

123141797

123448624

8066230

100831104

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107924401 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107924401 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	1	2	1	2	1	1	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107924401 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107924401 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**