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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107924526   transcription factor bHLH48 
 ghi-r.1   121213998   transcription factor bHLH60 
 ghi-r.1   107922319   transcription factor bHLH48 
 ghi-r.1   107891282   transcription factor bHLH48 
 ath-u.5   AT2G42300   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT3G57800   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103866621   transcription factor bHLH48 
 bra-r.6   103830121   transcription factor bHLH60 
 bra-r.6   103863024   transcription factor bHLH60 
 bna-r.1   106376778   transcription factor bHLH60-like 
 bna-r.1   106368187   transcription factor bHLH60 
 bna-r.1   106431571   transcription factor bHLH48 
 cit-r.1   102609347   transcription factor bHLH48 
 gma-u.5   100814124   transcription factor bHLH48 
 gma-u.5   100810862   transcription factor bHLH48 
 gma-u.5   100799133   transcription factor bHLH48 
 vvi-u.5   100241856   transcription factor bHLH48 
 ppo-u.5   7468956   transcription factor bHLH48 
 ppo-u.5   18099855   transcription factor bHLH48 
 mtr-u.5   11421654   transcription factor bHLH48 
 mtr-u.5   11431256   transcription factor bHLH60 
 sly-u.5   101258908   transcription factor bHLH48 
 sot-r.1   102582980   transcription factor bHLH48-like 
 nta-r.1   107823459   transcription factor bHLH48 
 nta-r.1   107790583   transcription factor bHLH48 
 nta-r.1   107776874   transcription factor bHLH48-like 
 osa-u.5   4341525   transcription factor bHLH48 
 zma-u.5   103629727   transcription factor bHLH48 
 zma-u.5   100273300   uncharacterized LOC100273300 
 tae-r.2   123153536   transcription factor bHLH48 
 tae-r.2   123160148   transcription factor bHLH48 
 tae-r.2   123165689   transcription factor bHLH48 
 hvu-r.1   123411689   transcription factor bHLH48-like 
 sbi-r.1   8082443   transcription factor bHLH48 
 bdi-r.1   100823833   transcription factor bHLH48 

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Top 50 coexpressed genes to 107924526 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924526 (ghi-r.1 coexpression data)

CoexMap"107924526"


ghiLOC107924526 | Entrez gene ID : 107924526    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 2 1 1 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016710506.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  golg 1  (predict for XP_016710506.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016710506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107924526
ghi-r.1
for
121213998
ghi-r.1
for
107922319
ghi-r.1
for
107891282
ath-u.5
for
AT2G42300
ath-u.5
for
AT3G57800
bra-r.6
for
103866621
bra-r.6
for
103830121
bra-r.6
for
103863024
bna-r.1
for
106376778
bna-r.1
for
106368187
bna-r.1
for
106431571
cit-r.1
for
102609347
gma-u.5
for
100814124
gma-u.5
for
100810862
gma-u.5
for
100799133
vvi-u.5
for
100241856
ppo-u.5
for
7468956
ppo-u.5
for
18099855
mtr-u.5
for
11421654
mtr-u.5
for
11431256
sly-u.5
for
101258908
sot-r.1
for
102582980
nta-r.1
for
107823459
nta-r.1
for
107790583
nta-r.1
for
107776874
osa-u.5
for
4341525
zma-u.5
for
103629727
zma-u.5
for
100273300
tae-r.2
for
123153536
tae-r.2
for
123160148
tae-r.2
for
123165689
hvu-r.1
for
123411689
sbi-r.1
for
8082443
bdi-r.1
for
100823833


Ortholog ID: 4057
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107924526 LOC121213998 LOC107891282 AT2G42300 AT3G57800 LOC103830121 LOC103863024 LOC103841682 LOC106390275 LOC106353224 LOC106438441 LOC102609347 LOC100814124 LOC100810862 PTF1 LOC100241856 LOC7468956 LOC18099855 LOC11421654 LOC11431256 LOC101258908 LOC102582980 LOC107823459 LOC107776874 LOC107800340 LOC4341525 LOC103629727 LOC100273300 LOC123153536 LOC123160148 LOC123165689 LOC123411689 LOC8082443 LOC100823833
Function* transcription factor bHLH48 transcription factor bHLH60 transcription factor bHLH48 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH60 transcription factor bHLH60 transcription factor bHLH60 transcription factor bHLH60 transcription factor bHLH60 transcription factor bHLH60-like transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH60 transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48 uncharacterized LOC100273300 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi03010 Ribosome 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr00071 Fatty acid degradation 2
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924526 121213998 107891282 818831 825530 103830121 103863024 103841682 106390275 106353224 106438441 102609347 100814124 100810862 100795486 100241856 7468956 18099855 11421654 11431256 101258908 102582980 107823459 107776874 107800340 4341525 103629727 100273300 123153536 123160148 123165689 123411689 8082443 100823833
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