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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107924746   transcription factor bHLH67 
 ath-u.5   AT2G46810   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT3G61950   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100789928   transcription factor bHLH57 
 gma-u.5   100783582   transcription factor bHLH57 
 vvi-u.5   100248794   transcription factor bHLH67 
 ppo-u.5   7478805   transcription factor bHLH70 
 mtr-u.5   25500607   transcription factor bHLH67 

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Top 50 coexpressed genes to 107924746 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924746 (ghi-r.1 coexpression data)

CoexMap"107924746"


ghiLOC107924746 | Entrez gene ID : 107924746    
Species ghi ath gma vvi ppo mtr bdi hvu bra cit bna sbi sly osa sot nta cre tae zma
Paralog 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016710816.2 [sequence] [blastp]
XP_040936952.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_016710816.2)
nucl 9  (predict for XP_040936952.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016710816.2)
other 7  (predict for XP_040936952.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107924746
ath-u.5
for
AT2G46810
ath-u.5
for
AT3G61950
gma-u.5
for
100789928
gma-u.5
for
100783582
vvi-u.5
for
100248794
ppo-u.5
for
7478805
mtr-u.5
for
25500607


Ortholog ID: 12649
Species ghi ghi ath ath bra bra bna cit gma gma vvi ppo mtr
Symbol LOC107924746 LOC107922718 AT3G61950 AT2G46810 LOC103848310 LOC103842020 LOC111208874 LOC102626155 LOC100789928 LOC100783582 LOC100248794 LOC7478805 LOC25500607
Function* transcription factor bHLH67 transcription factor bHLH67 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH67 transcription factor bHLH67 transcription factor bHLH67-like transcription factor bHLH57 transcription factor bHLH57 transcription factor bHLH57 transcription factor bHLH67 transcription factor bHLH70 transcription factor bHLH67
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
gma00053 Ascorbate and aldarate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924746 107922718 825368 819294 103848310 103842020 111208874 102626155 100789928 100783582 100248794 7478805 25500607
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