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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107926257   E3 ubiquitin-protein ligase BRE1-like 1 
 ath-u.5   HUB1   histone mono-ubiquitination 1 
 ath-u.5   HUB2   histone mono-ubiquitination 2 
 gma-u.5   100790337   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-u.5   100790744   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-u.5   100796610   E3 ubiquitin-protein ligase BRE1-like 2 
 vvi-u.5   100251829   E3 ubiquitin-protein ligase BRE1-like 2 
 vvi-u.5   100241021   E3 ubiquitin-protein ligase BRE1-like 1 
 ppo-u.5   18105143   E3 ubiquitin-protein ligase BRE1-like 1 
 ppo-u.5   7453935   E3 ubiquitin-protein ligase BRE1-like 1 
 mtr-u.5   25484108   E3 ubiquitin-protein ligase BRE1-like 2 
 mtr-u.5   11436813   E3 ubiquitin-protein ligase BRE1-like 1 
 mtr-u.5   11438680   E3 ubiquitin-protein ligase BRE1-like 2 
 sly-u.5   101254859   E3 ubiquitin-protein ligase BRE1-like 1 
 sly-u.5   101264751   E3 ubiquitin-protein ligase BRE1-like 2 
 osa-u.5   4349420   E3 ubiquitin-protein ligase BRE1-like 2 
 osa-u.5   4336589   E3 ubiquitin-protein ligase BRE1-like 1 
 zma-u.5   103626393   E3 ubiquitin-protein ligase BRE1-like 1 
 zma-u.5   103629598   E3 ubiquitin-protein ligase BRE1-like 1 
 zma-u.5   100274688   uncharacterized LOC100274688 

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Top 50 coexpressed genes to 107926257 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107926257 (ghi-r.1 coexpression data)

CoexMap"107926257"


ghiLOC107926257 | Entrez gene ID : 107926257    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 2 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0033503 [list] [network] HULC complex  (10 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_040931589.1 [sequence] [blastp]
XP_040931590.1 [sequence] [blastp]
XP_040931591.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_040931589.1)
nucl 7,  cyto 2  (predict for XP_040931590.1)
nucl 8,  cyto 2  (predict for XP_040931591.1)
Subcellular
localization
TargetP
other 5  (predict for XP_040931589.1)
other 9  (predict for XP_040931590.1)
other 5  (predict for XP_040931591.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107926257
ath-u.5
for
HUB1
ath-u.5
for
HUB2
gma-u.5
for
100790337
gma-u.5
for
100790744
gma-u.5
for
100796610
vvi-u.5
for
100251829
vvi-u.5
for
100241021
ppo-u.5
for
18105143
ppo-u.5
for
7453935
mtr-u.5
for
25484108
mtr-u.5
for
11436813
mtr-u.5
for
11438680
sly-u.5
for
101254859
sly-u.5
for
101264751
osa-u.5
for
4349420
osa-u.5
for
4336589
zma-u.5
for
103626393
zma-u.5
for
103629598
zma-u.5
for
100274688


Ortholog ID: 1919
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC121219845 LOC121223688 HUB1 HUB2 LOC103832600 LOC103866184 LOC106443573 LOC106433603 LOC102612288 LOC102624474 LOC100811776 LOC100790337 LOC100241021 LOC100251829 LOC18105143 LOC11436813 LOC25484108 LOC101264751 LOC101254859 LOC102583070 LOC102579128 LOC107793416 LOC107793770 LOC4336589 LOC4349420 LOC100274688 LOC103629598 LOC123063337 LOC123072319 LOC123404399 LOC123444859 LOC8063816 LOC8066523 LOC100825148 LOC100828493 CHLRE_14g625802v5
Function* E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 histone mono-ubiquitination 1 histone mono-ubiquitination 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 uncharacterized LOC100274688 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 6
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121219845 121223688 819104 841968 103832600 103866184 106443573 106433603 102612288 102624474 100811776 100790337 100241021 100251829 18105143 11436813 25484108 101264751 101254859 102583070 102579128 107793416 107793770 4336589 4349420 100274688 103629598 123063337 123072319 123404399 123444859 8063816 8066523 100825148 100828493 5718396
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