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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927313   proteasome subunit beta type-4 
 ghi-r.1   107962196   proteasome subunit beta type-4 
 ghi-r.1   107919942   proteasome subunit beta type-4 
 ghi-r.1   107893625   proteasome subunit beta type-4 
 ath-u.5   PBG1   20S proteasome beta subunit G1 
 bra-r.6   103838687   proteasome subunit beta type-4 
 bra-r.6   103847640   proteasome subunit beta type-4 
 bna-r.1   106386515   proteasome subunit beta type-4-like 
 bna-r.1   125580458   proteasome subunit beta type-4-like 
 bna-r.1   111205232   proteasome subunit beta type-4 
 cit-r.1   102615949   proteasome subunit beta type-4 
 gma-u.5   100527174   thr-endopeptidase 
 gma-u.5   100499795   20S proteasome beta subunit 
 vvi-u.5   100263853   proteasome subunit beta type-4 
 ppo-u.5   7462943   proteasome subunit beta type-4 
 ppo-u.5   7495712   proteasome subunit beta type-4 
 mtr-u.5   11442569   proteasome subunit beta type-4 
 mtr-u.5   11410764   proteasome subunit beta type-4 
 sly-u.5   101251952   proteasome subunit beta type-4 
 sot-r.1   102600302   proteasome subunit beta type-4 
 nta-r.1   107825913   proteasome subunit beta type-4 
 nta-r.1   107796267   proteasome subunit beta type-4 
 nta-r.1   107785082   proteasome subunit beta type-4 
 osa-u.5   4347573   proteasome subunit beta type-4 
 zma-u.5   100283981   proteasome subunit beta type 4 
 zma-u.5   100192865   proteasome subunit beta type 
 tae-r.2   123104410   proteasome subunit beta type-4 
 tae-r.2   123086696   proteasome subunit beta type-4 
 tae-r.2   543462   proteasome subunit beta type-4 
 hvu-r.1   123447929   proteasome subunit beta type-4-like 
 hvu-r.1   123399901   proteasome subunit beta type-4-like 
 sbi-r.1   8059004   proteasome subunit beta type-4 
 bdi-r.1   100831784   proteasome subunit beta type-4 
 cre-r.1   CHLRE_06g280850v5   uncharacterized protein 

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Top 50 coexpressed genes to 107927313 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927313 (ghi-r.1 coexpression data)

CoexMap"107927313"


ghiLOC107927313 | Entrez gene ID : 107927313    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 1 2 2 1 1 3 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0010498 [list] [network] proteasomal protein catabolic process  (475 genes)  IEA  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (16 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (69 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
Protein XP_016713870.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  plas 1,  nucl_plas 1,  nucl 1,  chlo 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for XP_016713870.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016713870.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927313
ghi-r.1
for
107962196
ghi-r.1
for
107919942
ghi-r.1
for
107893625
ath-u.5
for
PBG1
bra-r.6
for
103838687
bra-r.6
for
103847640
bna-r.1
for
106386515
bna-r.1
for
125580458
bna-r.1
for
111205232
cit-r.1
for
102615949
gma-u.5
for
100527174
gma-u.5
for
100499795
vvi-u.5
for
100263853
ppo-u.5
for
7462943
ppo-u.5
for
7495712
mtr-u.5
for
11442569
mtr-u.5
for
11410764
sly-u.5
for
101251952
sot-r.1
for
102600302
nta-r.1
for
107825913
nta-r.1
for
107796267
nta-r.1
for
107785082
osa-u.5
for
4347573
zma-u.5
for
100283981
zma-u.5
for
100192865
tae-r.2
for
123104410
tae-r.2
for
123086696
tae-r.2
for
543462
hvu-r.1
for
123447929
hvu-r.1
for
123399901
sbi-r.1
for
8059004
bdi-r.1
for
100831784
cre-r.1
for
CHLRE_06g280850v5


Ortholog ID: 4647
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC107927313 LOC107886397 LOC107941668 PBG1 LOC103838687 LOC103847640 LOC106386515 LOC111205232 LOC106397007 LOC102615949 LOC100527174 LOC100499795 LOC100263853 LOC7462943 LOC7495712 LOC11442569 LOC11410764 LOC101251952 LOC102600302 LOC107796267 LOC107785082 LOC107830555 LOC4347573 LOC100283981 LOC100192865 LOC123104410 LOC123086696 LOC123125158 LOC123447929 LOC123399901 LOC8059004 LOC100831784 CHLRE_06g280850v5
Function* proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 20S proteasome beta subunit G1 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4-like proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 thr-endopeptidase 20S proteasome beta subunit proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type 4 proteasome subunit beta type proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4-like proteasome subunit beta type-4-like proteasome subunit beta type-4 proteasome subunit beta type-4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 9
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
cit03250 Viral life cycle - HIV-1 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00190 Oxidative phosphorylation 3
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 14
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 9
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00030 Pentose phosphate pathway 2
hvu00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 7
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 13
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927313 107886397 107941668 842098 103838687 103847640 106386515 111205232 106397007 102615949 100527174 100499795 100263853 7462943 7495712 11442569 11410764 101251952 102600302 107796267 107785082 107830555 4347573 100283981 100192865 123104410 123086696 123125158 123447929 123399901 8059004 100831784 5720918
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