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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PBG1   20S proteasome beta subunit G1 
 ath-r.7   PBG1   20S proteasome beta subunit G1 
 ath-m.9   PBG1   20S proteasome beta subunit G1 
 ath-e.2   PBG1   20S proteasome beta subunit G1 
 ath-m.4.bio   PBG1   20S proteasome beta subunit G1 
 ath-m.4.hor   PBG1   20S proteasome beta subunit G1 
 ath-m.4.lig   PBG1   20S proteasome beta subunit G1 
 ath-m.4.str   PBG1   20S proteasome beta subunit G1 
 ath-m.4.tis   PBG1   20S proteasome beta subunit G1 
 gma-u.5   100527174   thr-endopeptidase 
 gma-u.5   100499795   20S proteasome beta subunit 
 vvi-u.5   100263853   proteasome subunit beta type-4 
 ppo-u.5   7495712   proteasome subunit beta type-4 
 ppo-u.5   7462943   proteasome subunit beta type-4 
 mtr-u.5   11410764   proteasome subunit beta type-4 
 mtr-u.5   11442569   proteasome subunit beta type-4 
 sly-u.5   101251952   proteasome subunit beta type-4 
 osa-u.5   4347573   proteasome subunit beta type-4 
 zma-u.5   100283981   proteasome subunit beta type 4 
 zma-u.5   100192865   proteasome subunit beta type 

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Top 50 coexpressed genes to PBG1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PBG1 (ath-u.5 coexpression data)

CoexMap"842098"


athPBG1 | Entrez gene ID : 842098      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03050 [list] [network] Proteasome (61 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  TAS  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (11 genes)  ISS  
GO:0005839 [list] [network] proteasome core complex  (23 genes)  TAS  
GO:0000502 [list] [network] proteasome complex  (53 genes)  IDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_176040.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 2,  cyto 1,  cysk 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_176040.1)
Subcellular
localization
TargetP
other 9  (predict for NP_176040.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PBG1
ath-r.7
for
PBG1
ath-m.9
for
PBG1
ath-e.2
for
PBG1
ath-m.4.bio
for
PBG1
ath-m.4.hor
for
PBG1
ath-m.4.lig
for
PBG1
ath-m.4.str
for
PBG1
ath-m.4.tis
for
PBG1
gma-u.5
for
100527174
gma-u.5
for
100499795
vvi-u.5
for
100263853
ppo-u.5
for
7495712
ppo-u.5
for
7462943
mtr-u.5
for
11410764
mtr-u.5
for
11442569
sly-u.5
for
101251952
osa-u.5
for
4347573
zma-u.5
for
100283981
zma-u.5
for
100192865


Ortholog ID: 4647
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi bdi cre
Symbol PBG1 LOC103847640 LOC103838687 LOC106397007 LOC106386515 LOC107927313 LOC107941668 LOC102615949 LOC100527174 LOC100499795 LOC100263853 LOC7462943 LOC7495712 LOC11410764 LOC11442569 LOC101251952 LOC102600302 LOC107830555 LOC107796267 LOC4347573 LOC100283981 LOC100192865 LOC123086696 LOC123104410 LOC123447929 LOC123399901 LOC8059004 LOC100831784 CHLRE_06g280850v5
Function* 20S proteasome beta subunit G1 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4-like proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 thr-endopeptidase 20S proteasome beta subunit proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type 4 proteasome subunit beta type proteasome subunit beta type-4 proteasome subunit beta type-4 proteasome subunit beta type-4-like proteasome subunit beta type-4-like proteasome subunit beta type-4 proteasome subunit beta type-4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 9
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
cit03250 Viral life cycle - HIV-1 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00190 Oxidative phosphorylation 3
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 14
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 9
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00030 Pentose phosphate pathway 2
hvu00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 7
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 13
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842098 103847640 103838687 106397007 106386515 107927313 107941668 102615949 100527174 100499795 100263853 7462943 7495712 11410764 11442569 101251952 102600302 107830555 107796267 4347573 100283981 100192865 123086696 123104410 123447929 123399901 8059004 100831784 5720918
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