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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927990   bifunctional dihydrofolate reductase-thymidylate synthase 
 ghi-r.1   107908795   bifunctional dihydrofolate reductase-thymidylate synthase 
 ghi-r.1   107928896   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 ghi-r.1   107937003   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 ath-u.5   THY-1   thymidylate synthase 1 
 ath-u.5   THY-2   thymidylate synthase 2 
 bra-r.6   103836808   bifunctional dihydrofolate reductase-thymidylate synthase 2 
 bra-r.6   103860451   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 bra-r.6   103862355   bifunctional dihydrofolate reductase-thymidylate synthase 2-like 
 bna-r.1   106442422   bifunctional dihydrofolate reductase-thymidylate synthase 1-like 
 bna-r.1   106406829   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 bna-r.1   125575152   bifunctional dihydrofolate reductase-thymidylate synthase 2-like 
 cit-r.1   102610005   bifunctional dihydrofolate reductase-thymidylate synthase-like 
 gma-u.5   DHFR-TS   bifunctional dihydrofolate reductase-thymidylate synthase 
 gma-u.5   100786311   bifunctional dihydrofolate reductase-thymidylate synthase 
 gma-u.5   100786329   bifunctional dihydrofolate reductase-thymidylate synthase-like protein 
 vvi-u.5   100267529   bifunctional dihydrofolate reductase-thymidylate synthase 
 vvi-u.5   100255872   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 ppo-u.5   7456362   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 ppo-u.5   7470002   bifunctional dihydrofolate reductase-thymidylate synthase 1 
 mtr-u.5   25495385   bifunctional dihydrofolate reductase-thymidylate synthase 
 mtr-u.5   11440565   bifunctional dihydrofolate reductase-thymidylate synthase 
 mtr-u.5   11415341   bifunctional dihydrofolate reductase-thymidylate synthase 
 sly-u.5   101267455   bifunctional dihydrofolate reductase-thymidylate synthase-like protein 
 sot-r.1   102593228   bifunctional dihydrofolate reductase-thymidylate synthase-like 
 nta-r.1   107796982   bifunctional dihydrofolate reductase-thymidylate synthase-like 
 nta-r.1   107794251   bifunctional dihydrofolate reductase-thymidylate synthase 
 nta-r.1   107792811   bifunctional dihydrofolate reductase-thymidylate synthase-like 
 osa-u.5   9271078   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 osa-u.5   4350527   bifunctional dihydrofolate reductase-thymidylate synthase 
 zma-u.5   100286018   uncharacterized LOC100286018 
 zma-u.5   541707   bifunctional dihydrofolate reductase-thymidylate synthase 
 tae-r.2   123047147   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 tae-r.2   123190811   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 tae-r.2   123054960   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 hvu-r.1   123428176   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 sbi-r.1   8068714   bifunctional dihydrofolate reductase-thymidylate synthase 
 bdi-r.1   100832991   putative bifunctional dihydrofolate reductase-thymidylate synthase 
 cre-r.1   CHLRE_17g715900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107927990 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927990 (ghi-r.1 coexpression data)

CoexMap"107927990"


ghiLOC107927990 | Entrez gene ID : 107927990    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 2 2 3 1 1 3 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00240 [list] [network] Pyrimidine metabolism (157 genes)
ghi00670 [list] [network] One carbon pool by folate (103 genes)
ghi00790 [list] [network] Folate biosynthesis (57 genes)
ghi01232 [list] [network] Nucleotide metabolism (202 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006231 [list] [network] dTMP biosynthetic process  (4 genes)  IEA  
GO:0046654 [list] [network] tetrahydrofolate biosynthetic process  (10 genes)  IEA  
GO:0006730 [list] [network] one-carbon metabolic process  (59 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004799 [list] [network] thymidylate synthase activity  (4 genes)  IEA  
GO:0004146 [list] [network] dihydrofolate reductase activity  (6 genes)  IEA  
Protein XP_016714626.2 [sequence] [blastp]
XP_040958653.1 [sequence] [blastp]
XP_040958655.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1,  vacu 1,  cysk 1  (predict for XP_016714626.2)
nucl 4,  cyto 4,  chlo 1,  vacu 1,  cysk 1  (predict for XP_040958653.1)
nucl 3,  chlo 2,  plas 2,  cyto_nucl 2  (predict for XP_040958655.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016714626.2)
other 9  (predict for XP_040958653.1)
other 9  (predict for XP_040958655.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927990
ghi-r.1
for
107908795
ghi-r.1
for
107928896
ghi-r.1
for
107937003
ath-u.5
for
THY-1
ath-u.5
for
THY-2
bra-r.6
for
103836808
bra-r.6
for
103860451
bra-r.6
for
103862355
bna-r.1
for
106442422
bna-r.1
for
106406829
bna-r.1
for
125575152
cit-r.1
for
102610005
gma-u.5
for
DHFR-TS
gma-u.5
for
100786311
gma-u.5
for
100786329
vvi-u.5
for
100267529
vvi-u.5
for
100255872
ppo-u.5
for
7456362
ppo-u.5
for
7470002
mtr-u.5
for
25495385
mtr-u.5
for
11440565
mtr-u.5
for
11415341
sly-u.5
for
101267455
sot-r.1
for
102593228
nta-r.1
for
107796982
nta-r.1
for
107794251
nta-r.1
for
107792811
osa-u.5
for
9271078
osa-u.5
for
4350527
zma-u.5
for
100286018
zma-u.5
for
541707
tae-r.2
for
123047147
tae-r.2
for
123190811
tae-r.2
for
123054960
hvu-r.1
for
123428176
sbi-r.1
for
8068714
bdi-r.1
for
100832991
cre-r.1
for
CHLRE_17g715900v5


Ortholog ID: 4675
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107927990 LOC107908795 LOC107928896 THY-1 THY-2 LOC103836808 LOC103860451 LOC103862355 LOC106406829 LOC106393759 LOC106354095 LOC102610005 DHFR-TS LOC100786311 LOC100786329 LOC100267529 LOC100255872 LOC7456362 LOC7470002 LOC25495385 LOC11440565 LOC11415341 LOC101267455 LOC102593228 LOC107796982 LOC107794251 LOC107792811 LOC9271078 LOC4350527 LOC100286018 LOC541707 LOC123047147 LOC123190811 LOC123054960 LOC123428176 LOC8068714 LOC100832991 CHLRE_17g715900v5
Function* bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase 1 thymidylate synthase 1 thymidylate synthase 2 bifunctional dihydrofolate reductase-thymidylate synthase 2 bifunctional dihydrofolate reductase-thymidylate synthase 1 bifunctional dihydrofolate reductase-thymidylate synthase 2-like bifunctional dihydrofolate reductase-thymidylate synthase 1 bifunctional dihydrofolate reductase-thymidylate synthase 2-like bifunctional dihydrofolate reductase-thymidylate synthase 2 bifunctional dihydrofolate reductase-thymidylate synthase-like bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase-like protein bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase 1 bifunctional dihydrofolate reductase-thymidylate synthase 1 bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase-like protein bifunctional dihydrofolate reductase-thymidylate synthase-like bifunctional dihydrofolate reductase-thymidylate synthase-like bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase-like putative bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase uncharacterized LOC100286018 bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase bifunctional dihydrofolate reductase-thymidylate synthase putative bifunctional dihydrofolate reductase-thymidylate synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 4
ghi00670 One carbon pool by folate 4
ghi00790 Folate biosynthesis 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 4
ghi00670 One carbon pool by folate 4
ghi00790 Folate biosynthesis 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 4
ghi00670 One carbon pool by folate 4
ghi00790 Folate biosynthesis 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00240 Pyrimidine metabolism 2
ath00670 One carbon pool by folate 2
ath00790 Folate biosynthesis 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00240 Pyrimidine metabolism 2
ath00670 One carbon pool by folate 2
ath00790 Folate biosynthesis 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna00670 One carbon pool by folate 2
bna00790 Folate biosynthesis 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 3
bna00670 One carbon pool by folate 3
bna00790 Folate biosynthesis 3
bna01232 Nucleotide metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 3
bna00670 One carbon pool by folate 3
bna00790 Folate biosynthesis 3
bna01232 Nucleotide metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 4
gma01232 Nucleotide metabolism 4
gma01240 Biosynthesis of cofactors 4
gma00230 Purine metabolism 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma00240 Pyrimidine metabolism 2
gma00670 One carbon pool by folate 2
gma00790 Folate biosynthesis 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 3
gma00240 Pyrimidine metabolism 2
gma00790 Folate biosynthesis 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 3
ppo00270 Cysteine and methionine metabolism 2
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00564 Glycerophospholipid metabolism 2
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 9
mtr00510 N-Glycan biosynthesis 3
mtr00513 Various types of N-glycan biosynthesis 3
mtr03060 Protein export 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 4
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00020 Citrate cycle (TCA cycle) 3
sot00620 Pyruvate metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00030 Pentose phosphate pathway 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 6
nta04144 Endocytosis 3
nta00240 Pyrimidine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 6
nta04144 Endocytosis 3
nta00240 Pyrimidine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma00240 Pyrimidine metabolism 4
zma00670 One carbon pool by folate 4
zma00790 Folate biosynthesis 4
zma01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00240 Pyrimidine metabolism 4
zma00670 One carbon pool by folate 4
zma00790 Folate biosynthesis 4
zma01232 Nucleotide metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae00670 One carbon pool by folate 3
tae00790 Folate biosynthesis 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
tae03440 Homologous recombination 6
tae03410 Base excision repair 5
tae03420 Nucleotide excision repair 5
tae03430 Mismatch repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00240 Pyrimidine metabolism 3
tae00670 One carbon pool by folate 3
tae00790 Folate biosynthesis 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 9
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 5
cre03430 Mismatch repair 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927990 107908795 107928896 816134 829609 103836808 103860451 103862355 106406829 106393759 106354095 102610005 547833 100786311 100786329 100267529 100255872 7456362 7470002 25495385 11440565 11415341 101267455 102593228 107796982 107794251 107792811 9271078 4350527 100286018 541707 123047147 123190811 123054960 123428176 8068714 100832991 5725986
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